Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04138 and RBAM_025430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence pep-align/BSNT_04138___ysnA.1.9828.seq
# -bsequence pep-align/RBAM_025430___ysnA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04138___ysnA-RBAM_025430___ysnA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04138___ysnA-RBAM_025430___ysnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04138___ysnA
# 2: RBAM_025430___ysnA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 175/195 (89.7%)
# Similarity: 187/195 (95.9%)
# Gaps: 0/195 ( 0.0%)
# Score: 896.0
#
#
#=======================================
BSNT_04138___ 1 MKEAIIATHNPGKVKEFKEILEPRGYDVKSLAEIGFTEEIEETGHTFEEN 50
||||||||||.||||||||||||:||.|.|||||||||||||||||||||
RBAM_025430__ 1 MKEAIIATHNQGKVKEFKEILEPKGYSVSSLAEIGFTEEIEETGHTFEEN 50
BSNT_04138___ 51 AILKAEAVAKAVNKMVIADDSGLSIDNLGGRPGVYSARYAGEQKDDQANI 100
||||||||||||||||||||||||:|||||||||||||||||.|||:||:
RBAM_025430__ 51 AILKAEAVAKAVNKMVIADDSGLSVDNLGGRPGVYSARYAGEAKDDKANM 100
BSNT_04138___ 101 EKVLSELKGIEKEQRTARFRCALAVSIPGEETKTVEGHVEGYIAEEPRGE 150
:|||||||||||||||||||||||||:||:|||||||||||||||.|.|:
RBAM_025430__ 101 DKVLSELKGIEKEQRTARFRCALAVSMPGQETKTVEGHVEGYIAEGPEGD 150
BSNT_04138___ 151 YGFGYDPIFIVKDKDKTMAELTSDEKNKISHRADALKKLSKLLEA 195
.||||||||||||||||||:|||.|||||||||:|||||||||::
RBAM_025430__ 151 NGFGYDPIFIVKDKDKTMAQLTSAEKNKISHRAEALKKLSKLLDS 195
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