Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04112 and RBAM_025370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence pep-align/BSNT_04112___ilvB.1.9828.seq
# -bsequence pep-align/RBAM_025370___ilvB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04112___ilvB-RBAM_025370___ilvB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04112___ilvB-RBAM_025370___ilvB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04112___ilvB
# 2: RBAM_025370___ilvB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity: 511/597 (85.6%)
# Similarity: 550/597 (92.1%)
# Gaps: 23/597 ( 3.9%)
# Score: 2707.0
#
#
#=======================================
BSNT_04112___ 1 -----------------------MRTNVQVDSASAKCTQTMSGALMLIES 27
|.||||.||.||:||:||:||||||||
RBAM_025370__ 1 MRQPALRFMNWILEGNIEKEELKMGTNVQADSLSAECTKTMNGALMLIES 50
BSNT_04112___ 28 LKKEKVEMIFGYPGGAVLPIYDKLYNSGLVHILPRHEQGAIHAAEGYARV 77
||||.||||||||||||||||||||.|||||||||||||||||||||||:
RBAM_025370__ 51 LKKENVEMIFGYPGGAVLPIYDKLYQSGLVHILPRHEQGAIHAAEGYARI 100
BSNT_04112___ 78 SGKPGVVIATSGPGATNLVTGLADAMIDSLPLVVFTGQVATSVIGSDAFQ 127
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025370__ 101 SGKPGVVIATSGPGATNLVTGLADAMIDSLPLVVFTGQVATSVIGSDAFQ 150
BSNT_04112___ 128 EADILGITMPVTKHSYQVRQPEDLPRIIKEAFHIATTGRPGPVLIDIPKD 177
||||||||||:||||||||:||||||:|||||||||||||||||||||||
RBAM_025370__ 151 EADILGITMPITKHSYQVRRPEDLPRVIKEAFHIATTGRPGPVLIDIPKD 200
BSNT_04112___ 178 VATIEGEFSYDHEMNLPGYQPTTEPNYLQIRKLVEAVSSAKKPVILAGAG 227
||..||||.||||::||||||..|||||||||||||||||||||||||||
RBAM_025370__ 201 VAAFEGEFRYDHEISLPGYQPVKEPNYLQIRKLVEAVSSAKKPVILAGAG 250
BSNT_04112___ 228 VLHGKASEELKNYAEQQQIPVAHTLLGLGGFPADHPLFLGMAGMHGTYTA 277
||||||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_025370__ 251 VLHGKASEDLKNYAEQQQIPVAHTLLGLGGFPADHPLFLGMAGMHGTYTA 300
BSNT_04112___ 278 NMALHECDLLISIGARFDDRVTGNLKHFARNAKIAHIDIDPAEIGKIMKT 327
||||:.|||||||||||||||||||||||::||:|||||||||||||::|
RBAM_025370__ 301 NMALYHCDLLISIGARFDDRVTGNLKHFAKSAKVAHIDIDPAEIGKIIET 350
BSNT_04112___ 328 QIPVVGDSKIVLQELIKQDGKQSDSSEWKKQLAEWKEEYPLWYVDNEEEG 377
|||||||||||||||:||:|||..:.|||:||:||||||||||.||.|||
RBAM_025370__ 351 QIPVVGDSKIVLQELLKQNGKQGQTEEWKQQLSEWKEEYPLWYTDNREEG 400
BSNT_04112___ 378 FKPQKLIEYIHQFTKGEAIVATDVGQHQMWSAQFYPFQKADKWVTSGGLG 427
.|||||||||||||.|||||||||||||||:||||||:||||||||||||
RBAM_025370__ 401 LKPQKLIEYIHQFTNGEAIVATDVGQHQMWAAQFYPFRKADKWVTSGGLG 450
BSNT_04112___ 428 TMGFGLPAAIGAQLAEKDATVVAVVGDGGFQMTLQELDVIRELNLPVKVV 477
|||||||||||||||:::|||||::||||||||||||||||:||||||||
RBAM_025370__ 451 TMGFGLPAAIGAQLADRNATVVAILGDGGFQMTLQELDVIRQLNLPVKVV 500
BSNT_04112___ 478 ILNNACLGMVRQWQEIFYEERYSESKFASQPDFVKLSEAYGIKGIRISSE 527
||||.||||||||||||||||||||||::|||||||||||||||:|||||
RBAM_025370__ 501 ILNNECLGMVRQWQEIFYEERYSESKFSAQPDFVKLSEAYGIKGVRISSE 550
BSNT_04112___ 528 AEAKVKLEEALTSREPVVIDVRVASEEKVFPMVAPGKGLHEMVGVKP 574
.||:.:|::||:|:||.|||||||..||||||:||||||||||||||
RBAM_025370__ 551 EEAEEELKKALSSKEPAVIDVRVAKSEKVFPMIAPGKGLHEMVGVKP 597
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