Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04111 and RBAM_025360

See DNA alignment / Visit BSNT_04111 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence pep-align/BSNT_04111___ilvH.1.9828.seq
#    -bsequence pep-align/RBAM_025360___ilvH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04111___ilvH-RBAM_025360___ilvH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04111___ilvH-RBAM_025360___ilvH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04111___ilvH
# 2: RBAM_025360___ilvH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     154/179 (86.0%)
# Similarity:   156/179 (87.2%)
# Gaps:          12/179 ( 6.7%)
# Score: 725.0
# 
#
#=======================================

BSNT_04111___      1 MKRIITLTVVNRSGVLNRITGLFTKRHYNIESITVGHTETAGVSRITFVV     50
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_025360__      1 MKRIITLTVVNRSGVLNRITGLFTKRHYNIESITVGHTETSGVSRITFVV     50

BSNT_04111___     51 HVEGENDVEQLTKQLNKQIDVLKVTDITNQSIVQRELALIKVVSAPSTRT    100
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_025360__     51 HVEGENDVEQLTKQLNKQIDVLKVTDITNQSIVQRELALIKVVSAPSART    100

BSNT_04111___    101 EINGIIEPFRASVVDVSRDSIVVQVTGESNKIEALIELLKPYGIKEIART    150
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_025360__    101 EINGIIEPFRASVVDVSRDSVVVQVTGESNKIEALIELLKPYGIKEIART    150

BSNT_04111___    151 G-TRLLRGVPSKRRHPIKQYLLYKT----    174
                     | |...||...|...       .||    
RBAM_025360__    151 GTTAFARGTQQKTSS-------NKTISIV    172


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