Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04103 and RBAM_025300
See
DNA alignment /
Visit
BSNT_04103 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence pep-align/BSNT_04103___ysoA.1.9828.seq
# -bsequence pep-align/RBAM_025300___ysoA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04103___ysoA-RBAM_025300___ysoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04103___ysoA-RBAM_025300___ysoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04103___ysoA
# 2: RBAM_025300___ysoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 281/334 (84.1%)
# Similarity: 310/334 (92.8%)
# Gaps: 0/334 ( 0.0%)
# Score: 1501.0
#
#
#=======================================
BSNT_04103___ 1 MTHDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTE 50
||||||.|.|||||.||:|||:|||:::|:|:|||||||||||:.:.|||
RBAM_025300__ 1 MTHDKKKADIIPFPRLKERLVDKGMAAMKDKQYQEALELFSEAVSHGDTE 50
BSNT_04103___ 51 SDLHLGMAICFLELGELEEAKSVCEKMLKEGYGHYFTVLQVYMTILIQLK 100
||:||||||||||||||||||.||||||.|||||||||||||||||||||
RBAM_025300__ 51 SDVHLGMAICFLELGELEEAKQVCEKMLNEGYGHYFTVLQVYMTILIQLK 100
BSNT_04103___ 101 KYEEVKSTIEAVLEENQLPAESAEQFYKLLDFSRKMTDPDREDEAWAEEY 150
:||||||||||||||||||||||||||:||:|||||||||::||||.|||
RBAM_025300__ 101 QYEEVKSTIEAVLEENQLPAESAEQFYRLLEFSRKMTDPDQQDEAWEEEY 150
BSNT_04103___ 151 EDTIDTEKVLASPEEQMNLIHSLKDRNVAKYTGLLKTILQDPSAHPIIKT 200
||.:|.||||.||.|||||||||||||:||||||||||||||.|||:|||
RBAM_025300__ 151 EDILDAEKVLNSPAEQMNLIHSLKDRNIAKYTGLLKTILQDPGAHPLIKT 200
BSNT_04103___ 201 MIVMLLTEHEYSKPVHISKFGESLTIEPSEIVPPDAAPILHRVLRVLDET 250
||:.|:.||:|||||||:|||:|:|..|||.|.|||||||||||||||||
RBAM_025300__ 201 MILTLMAEHDYSKPVHITKFGDSMTAVPSETVQPDAAPILHRVLRVLDET 250
BSNT_04103___ 251 LGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEMHGI 300
|||||||||||||||||||||||:||.||.|:||||||||||||||||||
RBAM_025300__ 251 LGNENPTLYAAVEELWRRHLYVLHPFMPKFLNADLWAAALHKVGYEMHGI 300
BSNT_04103___ 301 EIESEELHMMYEFTDRELDEACTMLKDIEEISYL 334
:||.|||||||||..|||:|||||:|||||||||
RBAM_025300__ 301 DIEPEELHMMYEFDSRELEEACTMIKDIEEISYL 334
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.