Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04103 and RBAM_025300
See
Amino acid alignment /
Visit
BSNT_04103 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04103___ysoA.1.9828.seq
# -bsequence dna-align/RBAM_025300___ysoA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04103___ysoA-RBAM_025300___ysoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04103___ysoA-RBAM_025300___ysoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04103___ysoA
# 2: RBAM_025300___ysoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity: 775/1014 (76.4%)
# Similarity: 775/1014 (76.4%)
# Gaps: 18/1014 ( 1.8%)
# Score: 2906.0
#
#
#=======================================
BSNT_04103___ 1 ATGACGCATGACAAGAAGAACGCAAAAATTATTCCTTTTCCTCATCTGAA 50
|||||||||||||||||.||.||..|.||.||||||||.||.|.||||||
RBAM_025300__ 1 ATGACGCATGACAAGAAAAAAGCTGATATCATTCCTTTCCCCCGTCTGAA 50
BSNT_04103___ 51 AGACCGCCTTGTGGAAAAGGGGATGTCATCACTAAAGGAAAAAAAGTATC 100
|||.|||.|.||.||.||.||||||.|..|..|.|||||.|||.||||||
RBAM_025300__ 51 AGAACGCTTGGTTGATAAAGGGATGGCCGCCATGAAGGATAAACAGTATC 100
BSNT_04103___ 101 AAGAAGCGCTTGAACTGTTTTCAGAAGCGATGAAATATGATGATACTGAA 150
|.||.||.||.||||||||||||||.|||.|.|...|.|..|||||.||.
RBAM_025300__ 101 AGGAGGCCCTCGAACTGTTTTCAGAGGCGGTAAGCCACGGCGATACCGAG 150
BSNT_04103___ 151 TCCGATCTTCACTTAGGGATGGCCATCTGCTTTTTAGAGCTGGGCGAGCT 200
|||||..|.||.|||||.|||||.||.||.|||.|.||.||.||.||..|
RBAM_025300__ 151 TCCGACGTACATTTAGGCATGGCGATTTGTTTTCTGGAACTCGGGGAATT 200
BSNT_04103___ 201 GGAAGAGGCAAAAAGCGTGTGCGAGAAGATGCTCAAAGAAGGTTATGGCC 250
||||||.||||||...||.||||||||.|||||.||.|||||.||.||||
RBAM_025300__ 201 GGAAGAAGCAAAACAAGTTTGCGAGAAAATGCTGAATGAAGGGTACGGCC 250
BSNT_04103___ 251 ATTATTTTACGGTTTTGCAGGTGTACATGACCATCTTAATTCAGCTCAAA 300
|||||||.||.||..|||||||||||||||||||.|||||||||||.|||
RBAM_025300__ 251 ATTATTTCACCGTACTGCAGGTGTACATGACCATTTTAATTCAGCTGAAA 300
BSNT_04103___ 301 AAATACGAGGAAGTCAAAAGCACCATTGAAGCCGTTTTGGAAGAAAATCA 350
.||||.||.||||||||||||||.||||||||.||..||||||||||.||
RBAM_025300__ 301 CAATATGAAGAAGTCAAAAGCACAATTGAAGCTGTGCTGGAAGAAAACCA 350
BSNT_04103___ 351 GCTGCCGGCAGAAAGCGCCGAGCAATTTTATAAGCTGCTGGATTTCAGCC 400
||||||.||||||||.||.||||||||.||...||||||.||.|||||||
RBAM_025300__ 351 GCTGCCCGCAGAAAGTGCGGAGCAATTCTACCGGCTGCTCGAATTCAGCC 400
BSNT_04103___ 401 GGAAAATGACCGATCCGGATCGTGAGGACGAGGCTTGGGCCGAAGAATAT 450
|.||||||||||||||.||.|...||||.||.||.||||..||.|||||.
RBAM_025300__ 401 GCAAAATGACCGATCCCGACCAGCAGGATGAAGCGTGGGAGGAGGAATAC 450
BSNT_04103___ 451 GAGGATACAATTGACACCGAGAAAGTGCTGGCAAGCCCTGAGGAGCAAAT 500
|||||.|...||||..|.||.|||||||||...|||||.|..||.|||||
RBAM_025300__ 451 GAGGACATTCTTGATGCGGAAAAAGTGCTGAACAGCCCCGCTGAACAAAT 500
BSNT_04103___ 501 GAATCTCATTCATTCCTTAAAAGACCGTAACGTAGCAAAGTATACA-GGA 549
||||||.||||||||..|.||||||||.||..|.||||| ||||| ||.
RBAM_025300__ 501 GAATCTGATTCATTCTCTCAAAGACCGCAATATTGCAAA--ATACACGGG 548
BSNT_04103___ 550 TTGCTC---AAAACAATCCTCCAAGACCCCTCAGCCCACCCGATTATCAA 596
| ||| |||||.||.||.|||||.||....||.||.||..|||||||
RBAM_025300__ 549 T--CTCTTAAAAACGATTCTTCAAGATCCGGGCGCTCATCCTCTTATCAA 596
BSNT_04103___ 597 AACGATGATTGTCATGCTGTTGACTGAGCATGAGTACAGTAAGCCTGTAC 646
.|||||||||.|.|.||||.||.|.||.|||||.|||||.|||||.||.|
RBAM_025300__ 597 GACGATGATTTTGACGCTGATGGCGGAACATGACTACAGCAAGCCGGTCC 646
BSNT_04103___ 647 ACATTAGTAAATTTGGCGAGTCGTTGACAATTGAACCGTCTGAGATTGTT 696
|.||||..|||||.|||||.||..||||....|..|||..|||.|..|||
RBAM_025300__ 647 ATATTACAAAATTCGGCGATTCAATGACCGCGGTTCCGAGTGAAACGGTT 696
BSNT_04103___ 697 CCGCCTGATGCCGCGCCGATTCTGCACCGTGTTCTCAGGGTGCTGGATGA 746
|.|||||||||.||.||||||.||||.||.||||||.|||||||.|||||
RBAM_025300__ 697 CAGCCTGATGCGGCTCCGATTTTGCATCGCGTTCTCCGGGTGCTTGATGA 746
BSNT_04103___ 747 GACACTTGGAAATGAAAATCCAACCTTATATGCAGCAGTAGAGGAATTGT 796
.||.||.||.||||||||.||.||.|||||.||.||.||.|||||..|||
RBAM_025300__ 747 AACGCTCGGCAATGAAAACCCTACATTATACGCTGCCGTCGAGGAGCTGT 796
BSNT_04103___ 797 GGAGAAGACATTTGTACGTTTTATATCCGTTCCAGCCGAAATTGCTGTCG 846
|||||||.|||.||||||||.|..|.||.||...||||||.||..||...
RBAM_025300__ 797 GGAGAAGGCATCTGTACGTTCTGCACCCTTTTATGCCGAAGTTTTTGAAC 846
BSNT_04103___ 847 GCTGACCTTTGGGCGGCTGCCCTTCATAAAGTCGGTTACGAGATGCACGG 896
||.||..|.||||||||.||.||||||||.||||||||||||||||||||
RBAM_025300__ 847 GCAGATTTATGGGCGGCGGCGCTTCATAAGGTCGGTTACGAGATGCACGG 896
BSNT_04103___ 897 GATTGAAATTGAAAGC--GAAGAACTTCATATGATGTATGAATTTACCGA 944
.|||||.|||| ||| ||.|||||||||||||||||.||.||| ||
RBAM_025300__ 897 CATTGACATTG--AGCCGGAGGAACTTCATATGATGTACGAGTTT---GA 941
BSNT_04103___ 945 CA---GAGAACTCGATGAAGCTTGCACAATGTTAAAAGATATTGAAGAAA 991
|| |.||||||||.|||||.|||||.|||.|.||.|||||||||||||
RBAM_025300__ 942 CAGCCGCGAACTCGAAGAAGCCTGCACGATGATTAAGGATATTGAAGAAA 991
BSNT_04103___ 992 TTTCTTATTTGTAA 1005
||||||||||||||
RBAM_025300__ 992 TTTCTTATTTGTAA 1005
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.