Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04092 and RBAM_025220

See DNA alignment / Visit BSNT_04092 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence pep-align/BSNT_04092.1.9828.seq
#    -bsequence pep-align/RBAM_025220___hemX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04092-RBAM_025220___hemX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04092-RBAM_025220___hemX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04092
# 2: RBAM_025220___hemX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     224/276 (81.2%)
# Similarity:   235/276 (85.1%)
# Gaps:          37/276 (13.4%)
# Score: 1175.0
# 
#
#=======================================

BSNT_04092         1 -------------------------------------MAFWLLSIVWTLQ     13
                                                          |||||||||||||
RBAM_025220__      1 MIDTAMARLNEATIVIYAVSVLFYFIDFLQHNRKAGKMAFWLLSIVWTLQ     50

BSNT_04092        14 TVYLAYFMWVTGRFPVLNVTEALYFYAWVLVTLSLVLTKLLRVDFIVFFT     63
                     ||||:||||.||||||||:|||||||||||||||||:|::||||||||||
RBAM_025220__     51 TVYLSYFMWQTGRFPVLNITEALYFYAWVLVTLSLVVTQILRVDFIVFFT    100

BSNT_04092        64 NVIGFSMIAIHTFSPTEQQSAAFSGQLVSELLVIHITMAILSYGAFSLSF    113
                     ||||||||||||||||:|.|||||||||||||||||||||||||||||||
RBAM_025220__    101 NVIGFSMIAIHTFSPTDQHSAAFSGQLVSELLVIHITMAILSYGAFSLSF    150

BSNT_04092       114 VFSVLYMFQYHLLKKKKWGKWLLRIEDLSKLDYMAYVLNVIGVPMLLLSL    163
                     |||:||.|||.|||||||||||||||||||||||||||||||||||||||
RBAM_025220__    151 VFSLLYQFQYSLLKKKKWGKWLLRIEDLSKLDYMAYVLNVIGVPMLLLSL    200

BSNT_04092       164 ILGVIWAYVSLETLYWFDAKVLGSFVVLLLYSYYLYIRLIKELQGKVAAL    213
                     ||||||||||||||||||:||||||:||||||||||||:|||||||||||
RBAM_025220__    201 ILGVIWAYVSLETLYWFDSKVLGSFIVLLLYSYYLYIRMIKELQGKVAAL    250

BSNT_04092       214 WNTACFLVLMINYFLLGSLSQFHWFS    239
                     ||:|||||||||||||||||||||||
RBAM_025220__    251 WNSACFLVLMINYFLLGSLSQFHWFS    276


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