Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04092 and RBAM_025220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence dna-align/BSNT_04092.1.9828.seq
# -bsequence dna-align/RBAM_025220___hemX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04092-RBAM_025220___hemX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04092-RBAM_025220___hemX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04092
# 2: RBAM_025220___hemX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity: 600/831 (72.2%)
# Similarity: 600/831 (72.2%)
# Gaps: 111/831 (13.4%)
# Score: 2520.0
#
#
#=======================================
BSNT_04092 0 -------------------------------------------------- 0
RBAM_025220__ 1 ATGATTGATACAGCAATGGCAAGACTTAATGAAGCGACAATTGTTATTTA 50
BSNT_04092 0 -------------------------------------------------- 0
RBAM_025220__ 51 TGCAGTAAGCGTCCTTTTTTACTTTATAGATTTTCTTCAACACAACCGGA 100
BSNT_04092 1 -----------ATGGCCTTCTGGTTGCTTTCTATTGTCTGGACTCTGCAA 39
|||||||||||||||||||||||||||||||||||||||
RBAM_025220__ 101 AGGCTGGGAAAATGGCCTTCTGGTTGCTTTCTATTGTCTGGACTCTGCAA 150
BSNT_04092 40 ACCGTGTATTTGGCCTATTTTATGTGGGTGACGGGGCGGTTTCCGGTATT 89
|||||.|||.|..|.|||||.||||||..||||||..|.||||||||.||
RBAM_025220__ 151 ACCGTCTATCTTTCTTATTTCATGTGGCAGACGGGCAGATTTCCGGTCTT 200
BSNT_04092 90 AAATGTGACGGAGGCGCTTTATTTTTATGCCTGGGTGCTTGTCACGCTGT 139
.|||.|.||.|||||.|||||.||||||||.|||||||||||||||||.|
RBAM_025220__ 201 GAATATTACAGAGGCCCTTTACTTTTATGCGTGGGTGCTTGTCACGCTCT 250
BSNT_04092 140 CACTGGTGCTGACAAAGCTTTTACGTGTTGACTTTATCGTGTTTTTTACA 189
||||.|||.|.||..||.||.|.||.|||||.||||||||||||||.||.
RBAM_025220__ 251 CACTTGTGGTCACGCAGATTCTGCGCGTTGATTTTATCGTGTTTTTCACG 300
BSNT_04092 190 AATGTTATAGGATTTTCTATGATCGCCATTCACACATTTTCACCGACAGA 239
|||||.||.||.||.||.|||||.||.||.||.||.|||||||||||.||
RBAM_025220__ 301 AATGTCATCGGTTTCTCGATGATTGCGATCCATACGTTTTCACCGACGGA 350
BSNT_04092 240 GCAGCAGTCAGCTGCTTTTTCCGGGCAGCTTGTATCCGAGCTTTTGGTGA 289
.|||||.||.||.|||||||||||.|||||.||.||.|||||||||||.|
RBAM_025220__ 351 TCAGCATTCGGCCGCTTTTTCCGGCCAGCTGGTCTCAGAGCTTTTGGTCA 400
BSNT_04092 290 TTCATATTACAATGGCGATTCTTTCATACGGCGCTTTTTCCCTTTCTTTC 339
||||||||||||||||||||||.||.|||||||||||||||||||||||.
RBAM_025220__ 401 TTCATATTACAATGGCGATTCTGTCTTACGGCGCTTTTTCCCTTTCTTTT 450
BSNT_04092 340 GTTTTTTCTGTGCTATATATGTTTCAATATCATCTGCTGAAAAAGAAAAA 389
||.|||||..|.||.|||..||||||||||..|.|..|.||.||||||||
RBAM_025220__ 451 GTCTTTTCGCTTCTTTATCAGTTTCAATATTCTTTATTAAAGAAGAAAAA 500
BSNT_04092 390 GTGGGGAAAATGGCTGTTGAGAATAGAAGATTTATCTAAGCTTGATTATA 439
||||||||||||||||||||||||.||||||||.||.||.||||||||||
RBAM_025220__ 501 GTGGGGAAAATGGCTGTTGAGAATTGAAGATTTGTCAAAACTTGATTATA 550
BSNT_04092 440 TGGCGTATGTTTTAAATGTCATTGGGGTTCCGATGCTGCTGCTGAGTTTG 489
||||.||.||||||||||||||.||||||||||||||||||.||||..||
RBAM_025220__ 551 TGGCTTACGTTTTAAATGTCATCGGGGTTCCGATGCTGCTGTTGAGCCTG 600
BSNT_04092 490 ATTCTCGGCGTCATATGGGCATATGTCTCACTAGAAACGCTGTATTGGTT 539
||..|.|||||.||.|||||.|||||.||.||.|||||||||||.|||||
RBAM_025220__ 601 ATATTAGGCGTGATCTGGGCGTATGTGTCGCTGGAAACGCTGTACTGGTT 650
BSNT_04092 540 TGACGCCAAAGTGCTTGGTTCGTTTGTCGTCCTGCTGCTGTACAGCTATT 589
|||..|.||||||||.|||||||||.|.||.|||||..|.||||||||.|
RBAM_025220__ 651 TGATTCAAAAGTGCTCGGTTCGTTTATTGTGCTGCTTTTATACAGCTACT 700
BSNT_04092 590 ATCTTTATATCAGGCTGATTAAAGAGCTGCAAGGAAAGGTCGCTGCACTG 639
||.|.||||||||..|||||||.||.|||||.|||||.||.||.||..|.
RBAM_025220__ 701 ATTTATATATCAGAATGATTAAGGAACTGCAGGGAAAAGTGGCGGCGTTA 750
BSNT_04092 640 TGGAATACGGCTTGTTTTCTGGTGCTGATGATCAATTATTTCCTGCTTGG 689
||||||.|.||.||||||||.|||||||||||.|||||.||||||||.||
RBAM_025220__ 751 TGGAATTCAGCATGTTTTCTCGTGCTGATGATTAATTACTTCCTGCTCGG 800
BSNT_04092 690 AAGCCTGTCGCAATTCCATTGGTTCAGTTAA 720
|||||||||||||||||||||||||||||||
RBAM_025220__ 801 AAGCCTGTCGCAATTCCATTGGTTCAGTTAA 831
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