Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04090 and RBAM_025210

See DNA alignment / Visit BSNT_04090 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence pep-align/BSNT_04090___hemC.1.9828.seq
#    -bsequence pep-align/RBAM_025210___hemC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04090___hemC-RBAM_025210___hemC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04090___hemC-RBAM_025210___hemC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04090___hemC
# 2: RBAM_025210___hemC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     264/314 (84.1%)
# Similarity:   293/314 (93.3%)
# Gaps:           1/314 ( 0.3%)
# Score: 1376.0
# 
#
#=======================================

BSNT_04090___      1 MMRTIKVGSRRSKLAMTQTKWVIQKLKEINPSFVFEIKEIVTKGDRIVDV     50
                      ||||||||||||||||||||||.||||:|||:.|||:|||||||||:||
RBAM_025210__      1 -MRTIKVGSRRSKLAMTQTKWVINKLKELNPSYNFEIREIVTKGDRILDV     49

BSNT_04090___     51 TLSKVGGKGLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPER    100
                     ||||||||||||||||||||::||||||||||||||||||||||||||:|
RBAM_025210__     50 TLSKVGGKGLFVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKR     99

BSNT_04090___    101 EDPRDALISKNRVKLSEMKEGAVIGTSSLRRSAQLLIERPDLTIKWIRGN    150
                     ||||||||||...||..:|||.:|||||||||||:|.|||||||||||||
RBAM_025210__    100 EDPRDALISKGHQKLDGIKEGGIIGTSSLRRSAQILAERPDLTIKWIRGN    149

BSNT_04090___    151 IDTRLQKLETEDYDAIILAAAGLSRMGWKQDVVTEFLEPERCLPAVGQGA    200
                     |||||||||||||||||||||||||||||.|||:|||||:||||||||||
RBAM_025210__    150 IDTRLQKLETEDYDAIILAAAGLSRMGWKDDVVSEFLEPDRCLPAVGQGA    199

BSNT_04090___    201 LAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEGGCQVPIAGYS    250
                     |||||||||||||.||:|||||||:|||.||||||:|||||||||||||:
RBAM_025210__    200 LAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEGGCQVPIAGYA    249

BSNT_04090___    251 VLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADRGAKD    300
                     .:|.:||:|:.|||||||||.|:|||..|:||||:||||||:|:::|||.
RBAM_025210__    250 SVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAMMSEKGAKA    299

BSNT_04090___    301 LIDRVKRELDEDGK    314
                     |||.||:|||:|||
RBAM_025210__    300 LIDSVKQELDQDGK    313


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