Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04085 and RBAM_025170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_04085___spoVID.1.9828.seq
# -bsequence pep-align/RBAM_025170___spoVID.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04085___spoVID-RBAM_025170___spoVID.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04085___spoVID-RBAM_025170___spoVID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04085___spoVID
# 2: RBAM_025170___spoVID
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 312/654 (47.7%)
# Similarity: 384/654 (58.7%)
# Gaps: 122/654 (18.7%)
# Score: 1294.5
#
#
#=======================================
BSNT_04085___ 1 MPQNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIIGSL 50
||.|||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_025170__ 1 MPHNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIKGSL 50
BSNT_04085___ 51 ELTGEYNIDQNKHTEEIYTDKRFVEQVRKREDGSAELTHCFPVDITIPKN 100
|||||||||.:.|.||:..:.|.||:||.||||:|||.||||||||||||
RBAM_025170__ 51 ELTGEYNIDHSSHFEELDRELRHVEEVRAREDGTAELIHCFPVDITIPKN 100
BSNT_04085___ 101 KVSHLQDVFVFIDAFDYQLTDSRILTIQADLAIEGLLDDTQDKEPEIPLY 150
|||||.|||||||||||||||||||||||||||||||::::.||||||||
RBAM_025170__ 101 KVSHLNDVFVFIDAFDYQLTDSRILTIQADLAIEGLLEESEPKEPEIPLY 150
BSNT_04085___ 151 EAPAAFREEELSEPSAHSVVE-EPGASSAEEAVLQHEPPAEPPELFISKA 199
.||...|||.::....||..| || |.:::||| |.| |.:|:.
RBAM_025170__ 151 VAPEFAREEMINLAGHHSEDENEP------ELMIRHEP--EIP-LTVSEE 191
BSNT_04085___ 200 GLREELETEKAESEPPESVASEPEARED---VKEEEESEELAVPETEVRA 246
..: ||:|.|.|.|..:..|.|.:|. ::|.||.:|.| .:..
RBAM_025170__ 192 AAQ---ETKKNEEEIPPLIRLEEEEQEAAPILREREEEQETA----PILR 234
BSNT_04085___ 247 ESETEESEPEPDPSEIEIQEIVKAKKETAEPAAAIADVREEADSPAETEL 296
|.|.||.|..| |::.::|..:..|.|...|||.:..|...|
RBAM_025170__ 235 EREEEEQETAP---------ILREREEEEQETAPILREREEEEQEAAPIL 275
BSNT_04085___ 297 REHAGAEE----------------SPAL----EAELHSETVIAEEKEETT 326
|||...|| :|.| |.|..:..::.|.|||..
RBAM_025170__ 276 REHKEEEEETAPILREQEEEEQEAAPILREREEEEQETAPILRERKEEEQ 325
BSNT_04085___ 327 ESPNHEYALRQEAQNEEAAQSDQADPALC------QEEAEADEALESVSE 370
|:.. .||::.:..:.....:..|.:. .||||....:.:|..
RBAM_025170__ 326 ETAP---ILREQEEVPKPVSFTEPPPPVSFQHEEKPEEAEEPAIMSAVRN 372
BSNT_04085___ 371 AALSIEDSRETASAVYVENDK----------------ADFHFHQK----- 399
..:..:||.|.......:|:. |:..|.||
RBAM_025170__ 373 GPVFEDDSAEVQEEPKDDNEPVFPAFTLTPHAEKPKIAEQPFLQKEEQPE 422
BSNT_04085___ 400 ------TSSEEASQEELPEPA---------YRTFLPEQEEEDSFYSAPKL 434
.|..||:::| .||| ||.|:|||:||: |||||||
RBAM_025170__ 423 AEPLLRQSDHEAAEDE-DEPAVFQEEQAPVYREFVPEQQEEE-FYSAPKL 470
BSNT_04085___ 435 LEEEEQEEESFEIEVRKTPSAEE---------------PKEETPFQSFQL 469
||||.|:|..|||||||....|| |.|| |.|:.|
RBAM_025170__ 471 LEEEAQDEVGFEIEVRKMAPPEEETGKPLDLSFQFSKLPPEE-PAQAEQ- 518
BSNT_04085___ 470 PESSETERKETDAVPRVAPAAETKEPQTKESDNSLYLTKLFTKEADEFSR 519
||..:.|||..:|.|.. :.||:|||.|||||||:|.::|||
RBAM_025170__ 519 PEPLKPERKNEEAAPGT---------EQKENDNSHYLTKLFTREEEKFSR 559
BSNT_04085___ 520 MKICIVQQEDTIERLCERYEITSQQLIRMNSLALDDELKAGQILYIPQYK 569
||||||||:|||:|:||||:||||||||.|:|:.||||:.||:||||:|.
RBAM_025170__ 560 MKICIVQQQDTIDRVCERYDITSQQLIRTNALSFDDELEEGQLLYIPEYN 609
BSNT_04085___ 570 NSHA 573
||||
RBAM_025170__ 610 NSHA 613
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