Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04074 and RBAM_025110

See DNA alignment / Visit BSNT_04074 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_04074___spoIIB.1.9828.seq
#    -bsequence pep-align/RBAM_025110___spoIIB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04074___spoIIB-RBAM_025110___spoIIB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04074___spoIIB-RBAM_025110___spoIIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04074___spoIIB
# 2: RBAM_025110___spoIIB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     206/334 (61.7%)
# Similarity:   264/334 (79.0%)
# Gaps:           3/334 ( 0.9%)
# Score: 1038.0
# 
#
#=======================================

BSNT_04074___      1 MKKRKNKKNSKAAEKALKVTINGKEETVYEQETPETEADKSMTFSNWEEK     50
                     |||||:||:|||...||||||||:|||:|.||..:...:|::|||||||.
RBAM_025110__      1 MKKRKSKKHSKAKNNALKVTINGQEETMYGQEDVKEGGEKTVTFSNWEET     50

BSNT_04074___     51 RQAEQEVAASQEHPDEDEFNWDSEED-KVFKEDPKVVPPFQKKKTKLYAK     99
                     ::||||.|||.|.|.|::||||.|:: :||::|||||||:||||...:..
RBAM_025110__     51 KKAEQETAASHEDPKEEDFNWDHEKNSEVFEDDPKVVPPYQKKKNGPHFP    100

BSNT_04074___    100 GKTGAAKPVKRVAATIAFAAVIGTGLGLFALNISGNKEASAPASLEDSLG    149
                     .|...:.|||:...|||.|||:||||||.|||:||:||||||||.:....
RBAM_025110__    101 KKKQPSSPVKKAVTTIAVAAVLGTGLGLVALNMSGSKEASAPASADKGSQ    150

BSNT_04074___    150 SQTAKAGDTSTDK-QTSGTEKQAAQTEGTYKTYAVQAGKFSNEKGAETLT    198
                     .|||||||.|.|| :|:|| ..|..:||.||||||||||||:||||:||.
RBAM_025110__    151 GQTAKAGDVSKDKSETAGT-GDAESSEGNYKTYAVQAGKFSSEKGAQTLV    199

BSNT_04074___    199 EQLTEKGYSAVSLSKDDGYTYVIAGLASDKDVSQQLGQVLIDSDFEAWGG    248
                     :||||||||||||:|:|||||||||||::|.:||||||.|||.|||||||
RBAM_025110__    200 DQLTEKGYSAVSLAKEDGYTYVIAGLAAEKSLSQQLGQTLIDHDFEAWGG    249

BSNT_04074___    249 KELSLSIESDMTDSFKETAELAAKAILGEDITKASVEKIEKSLGETKASE    298
                     ||||.:::|.:.||||:.:||:||||.|:|::|..|.:..|:.....|::
RBAM_025110__    250 KELSFAVDSGLEDSFKQASELSAKAITGKDLSKTEVAEAAKAADGADAAD    299

BSNT_04074___    299 TGEKKAILQALKELEDPSAEAGWKAQQQLLAVVK    332
                     ..:|:|:||||||||...:|:|||||::||:|||
RBAM_025110__    300 KKQKEAVLQALKELETSGSESGWKAQKELLSVVK    333


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