Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04070 and RBAM_025090
See
DNA alignment /
Visit
BSNT_04070 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence pep-align/BSNT_04070___radC.1.9828.seq
# -bsequence pep-align/RBAM_025090___radC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04070___radC-RBAM_025090___radC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04070___radC-RBAM_025090___radC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04070___radC
# 2: RBAM_025090___radC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 203/231 (87.9%)
# Similarity: 218/231 (94.4%)
# Gaps: 0/231 ( 0.0%)
# Score: 1040.0
#
#
#=======================================
BSNT_04070___ 1 MVIHDLPLKLKDFPIKEKPRERLLKVGAENLANHELLAILLRTGTKHESV 50
|:|.||||||:|||.|||||||||..|||:|:|:||||||||||||||||
RBAM_025090__ 1 MIIRDLPLKLRDFPEKEKPRERLLHFGAEHLSNNELLAILLRTGTKHESV 50
BSNT_04070___ 51 LDLSNRLLRSFDGLRLLKEASVEELSSIPGIGMVKAIQILAAVELGSRIH 100
::|::||||:||||||||.||.:|||||||||.|||:|||||:|||||||
RBAM_025090__ 51 MNLAHRLLRTFDGLRLLKGASAQELSSIPGIGTVKAVQILAAIELGSRIH 100
BSNT_04070___ 101 KLANEEHFVIRSPEDGANLVMEDMRFLTQEHFVCLYLNTKNQVIHKRTVF 150
|.:..||.|||||||||..||||||||:||||||||||||||||||||||
RBAM_025090__ 101 KTSAGEHCVIRSPEDGAKYVMEDMRFLSQEHFVCLYLNTKNQVIHKRTVF 150
BSNT_04070___ 151 IGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTRRL 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025090__ 151 IGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTRRL 200
BSNT_04070___ 201 FECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231
|||||||||||||||||||||||||||||||
RBAM_025090__ 201 FECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.