Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04070 and RBAM_025090

See DNA alignment / Visit BSNT_04070 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_04070___radC.1.9828.seq
#    -bsequence pep-align/RBAM_025090___radC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04070___radC-RBAM_025090___radC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04070___radC-RBAM_025090___radC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04070___radC
# 2: RBAM_025090___radC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity:     203/231 (87.9%)
# Similarity:   218/231 (94.4%)
# Gaps:           0/231 ( 0.0%)
# Score: 1040.0
# 
#
#=======================================

BSNT_04070___      1 MVIHDLPLKLKDFPIKEKPRERLLKVGAENLANHELLAILLRTGTKHESV     50
                     |:|.||||||:|||.|||||||||..|||:|:|:||||||||||||||||
RBAM_025090__      1 MIIRDLPLKLRDFPEKEKPRERLLHFGAEHLSNNELLAILLRTGTKHESV     50

BSNT_04070___     51 LDLSNRLLRSFDGLRLLKEASVEELSSIPGIGMVKAIQILAAVELGSRIH    100
                     ::|::||||:||||||||.||.:|||||||||.|||:|||||:|||||||
RBAM_025090__     51 MNLAHRLLRTFDGLRLLKGASAQELSSIPGIGTVKAVQILAAIELGSRIH    100

BSNT_04070___    101 KLANEEHFVIRSPEDGANLVMEDMRFLTQEHFVCLYLNTKNQVIHKRTVF    150
                     |.:..||.|||||||||..||||||||:||||||||||||||||||||||
RBAM_025090__    101 KTSAGEHCVIRSPEDGAKYVMEDMRFLSQEHFVCLYLNTKNQVIHKRTVF    150

BSNT_04070___    151 IGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTRRL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025090__    151 IGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTRRL    200

BSNT_04070___    201 FECGNLIGIELLDHLVIGDKKFVSLKEKGYL    231
                     |||||||||||||||||||||||||||||||
RBAM_025090__    201 FECGNLIGIELLDHLVIGDKKFVSLKEKGYL    231


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