Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04070 and RBAM_025090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04070___radC.1.9828.seq
# -bsequence dna-align/RBAM_025090___radC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04070___radC-RBAM_025090___radC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04070___radC-RBAM_025090___radC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04070___radC
# 2: RBAM_025090___radC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 698
# Identity: 564/698 (80.8%)
# Similarity: 564/698 (80.8%)
# Gaps: 4/698 ( 0.6%)
# Score: 2279.0
#
#
#=======================================
BSNT_04070___ 1 TTGGTCATACACGATCTGCCATTAAAACTCAAAGATTTCCC--AATCAAA 48
|||.||||.|..||||||||.||||||.|.|.||||||||| || |||
RBAM_025090__ 1 TTGATCATCCGTGATCTGCCGTTAAAATTAAGAGATTTCCCCGAA--AAA 48
BSNT_04070___ 49 GAAAAGCCAAGAGAACGGCTCCTGAAAGTCGGAGCCGAGAACTTAGCGAA 98
|||||.||.|||||.|||||.|||.|..||||||||||..|..|..|.||
RBAM_025090__ 49 GAAAAACCGAGAGAGCGGCTTCTGCACTTCGGAGCCGAACATCTCTCTAA 98
BSNT_04070___ 99 TCATGAACTTTTGGCTATATTATTGCGGACAGGGACTAAACACGAATCTG 148
..|||||.|..|.||.||..|..|||||||.||.||.|||||.||.||.|
RBAM_025090__ 99 CAATGAATTGCTCGCCATCCTGCTGCGGACGGGAACGAAACATGAGTCCG 148
BSNT_04070___ 149 TTTTGGACCTGTCAAACCGGCTGCTGCGCTCATTTGACGGGCTGCGCCTG 198
|..||.||||..|..|||||||||||||..|.||||||||||||||.|||
RBAM_025090__ 149 TCATGAACCTCGCTCACCGGCTGCTGCGGACGTTTGACGGGCTGCGACTG 198
BSNT_04070___ 199 CTCAAGGAAGCATCGGTTGAAGAGCTGTCGAGCATCCCGGGAATCGGTAT 248
.|.||.|..||.||.|...|.|||||.||.|||||.|||||||||||.|.
RBAM_025090__ 199 TTAAAAGGCGCCTCTGCCCAGGAGCTTTCCAGCATTCCGGGAATCGGCAC 248
BSNT_04070___ 249 GGTAAAAGCGATTCAAATACTGGCTGCAGTTGAGCTTGGAAGCCGGATTC 298
|||.|||||..||||.||.||.||.|||.|||||||.||.|||||.||||
RBAM_025090__ 249 GGTGAAAGCCGTTCAGATTCTTGCCGCAATTGAGCTGGGGAGCCGCATTC 298
BSNT_04070___ 299 ATAAATTAGCCAACGAAGAACATTTCGTTATTCGCTCCCCGGAAGACGGC 348
||||...|.||..||..||.||||.|||.||.|||||.|||||||||||.
RBAM_025090__ 299 ATAAGACATCCGCCGGGGAGCATTGCGTCATCCGCTCTCCGGAAGACGGG 348
BSNT_04070___ 349 GCTAATCTTGTCATGGAGGATATGCGCTTTTTAACCCAGGAGCATTTTGT 398
||.||...|||.|||||||||||||||||||||.||||||||||||||||
RBAM_025090__ 349 GCGAAGTATGTGATGGAGGATATGCGCTTTTTATCCCAGGAGCATTTTGT 398
BSNT_04070___ 399 CTGTTTATACTTAAATACAAAAAATCAAGTCATCCATAAACGCACCGTAT 448
|||||||||.||||||||.||||||||||||||.||||||||||||||.|
RBAM_025090__ 399 CTGTTTATATTTAAATACCAAAAATCAAGTCATTCATAAACGCACCGTTT 448
BSNT_04070___ 449 TTATCGGAAGCCTGAATTCATCTATTGTCCACCCGCGAGAGGTGTTTAAA 498
||||||||||.||||||||||||||||||||||||||.||||||||||||
RBAM_025090__ 449 TTATCGGAAGTCTGAATTCATCTATTGTCCACCCGCGGGAGGTGTTTAAA 498
BSNT_04070___ 499 GAAGCGTTTAAACGATCTGCCGCTTCCTTTATCTGTGTTCATAATCATCC 548
|||||.||.||||||||.|||||.|||||.||.||||||||.||||||||
RBAM_025090__ 499 GAAGCTTTCAAACGATCCGCCGCGTCCTTCATTTGTGTTCACAATCATCC 548
BSNT_04070___ 549 TTCTGGAGATCCGACGCCGAGCAGGGAAGATATTGAAGTGACAAGACGGC 598
|||.||||||||.||.|||||||||||||||||.||.||.||.||.||||
RBAM_025090__ 549 TTCAGGAGATCCTACACCGAGCAGGGAAGATATAGAGGTAACCAGGCGGC 598
BSNT_04070___ 599 TGTTTGAATGCGGAAACCTGATTGGCATCGAGCTGCTTGACCATTTGGTG 648
|.|||||.||||||||..|.||.||||||||||||||.||.||||||||.
RBAM_025090__ 599 TTTTTGAGTGCGGAAATTTAATCGGCATCGAGCTGCTGGATCATTTGGTC 648
BSNT_04070___ 649 ATCGGGGATAAAAAATTTGTGAGTTTAAAGGAAAAAGGATATTTGTAA 696
||.||.||.|||||||||||||||||||||||||||||||||||||||
RBAM_025090__ 649 ATTGGTGACAAAAAATTTGTGAGTTTAAAGGAAAAAGGATATTTGTAA 696
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