Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04068 and RBAM_025070

See DNA alignment / Visit BSNT_04068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_04068___mreC.1.9828.seq
#    -bsequence pep-align/RBAM_025070___mreC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04068___mreC-RBAM_025070___mreC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04068___mreC-RBAM_025070___mreC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04068___mreC
# 2: RBAM_025070___mreC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     242/290 (83.4%)
# Similarity:   268/290 (92.4%)
# Gaps:           3/290 ( 1.0%)
# Score: 1255.0
# 
#
#=======================================

BSNT_04068___      1 MPNKRLMLLLLCIIILVAMIGFSLKGGRNTTWPEKVIGDTTGVFQNIFHT     50
                     |||||||||||||||||||||||||.|||||||||:||||||||||||||
RBAM_025070__      1 MPNKRLMLLLLCIIILVAMIGFSLKNGRNTTWPEKLIGDTTGVFQNIFHT     50

BSNT_04068___     51 PAEFFAGIFENINDLKNTYKENERLREKLDGQTQYEAKLQELEEENKSLR    100
                     |||:|||.|.:|.|||||||||||||:|||||||||||||||::|||.||
RBAM_025070__     51 PAEYFAGFFGDIKDLKNTYKENERLRQKLDGQTQYEAKLQELKDENKKLR    100

BSNT_04068___    101 DELGHVKSIKDYKPILATVIARSPDNWAKQVTINKGTQQNVAKDMAVTNE    150
                     |||||||||.||.|||||||||:||.|.||:.|||||:|.||||||||||
RBAM_025070__    101 DELGHVKSISDYDPILATVIARNPDQWYKQIMINKGTKQKVAKDMAVTNE    150

BSNT_04068___    151 KGALIGKIKSSGLNNFTSTVQLLSDTDRNNRVATKISGKKGSKGYGLIEG    200
                     ||||:|||||||||:|||.||||||.||||||||||||||||||||||||
RBAM_025070__    151 KGALVGKIKSSGLNSFTSAVQLLSDVDRNNRVATKISGKKGSKGYGLIEG    200

BSNT_04068___    201 YDKEKKRLKMTIIERKDKQDVKKGDLIETSGTGGVFPEGLTIGEVTDIES    250
                     |||:|:.|||||:|..:|::||||||:||||||||||:|||:|||||:||
RBAM_025070__    201 YDKKKQTLKMTILEPDEKREVKKGDLVETSGTGGVFPQGLTVGEVTDVES    250

BSNT_04068___    251 DSYGLTKVAYVKPAADLTDLNNVIVVNRDVPTVDTEEEGS    290
                     |:|||||:|||||||||.||::||||||   :|.|.||||
RBAM_025070__    251 DAYGLTKIAYVKPAADLYDLDHVIVVNR---SVATGEEGS    287


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