Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04068 and RBAM_025070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04068___mreC.1.9828.seq
# -bsequence dna-align/RBAM_025070___mreC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04068___mreC-RBAM_025070___mreC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04068___mreC-RBAM_025070___mreC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04068___mreC
# 2: RBAM_025070___mreC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 879
# Identity: 690/879 (78.5%)
# Similarity: 690/879 (78.5%)
# Gaps: 21/879 ( 2.4%)
# Score: 2672.5
#
#
#=======================================
BSNT_04068___ 1 ATGCCGAATAAGCGGTTAATGCTATTACTTCTGTGTATTATCATATTGGT 50
||||||||.||.||||||||||||||||||||||||||||||||||||||
RBAM_025070__ 1 ATGCCGAACAAACGGTTAATGCTATTACTTCTGTGTATTATCATATTGGT 50
BSNT_04068___ 51 GGCTATGATTGGATTTTCGCTGAAGGGCGGCCGCAATACCACCTGGCCTG 100
|||||||||||||||.|||||||||..||||||.||||||||||||||||
RBAM_025070__ 51 GGCTATGATTGGATTCTCGCTGAAGAACGGCCGTAATACCACCTGGCCTG 100
BSNT_04068___ 101 AGAAAG-TGATCGGCGATACGACGGGAGTATTTCAAAATATTTTTCATAC 149
| |||| |||||||.|||||||||||||||||||||||.||||||||.||
RBAM_025070__ 101 A-AAAGCTGATCGGTGATACGACGGGAGTATTTCAAAACATTTTTCACAC 149
BSNT_04068___ 150 GCCTGCCGAATTTTTTGCAGGAATATTTGAGAACATCAATGATTTAAAAA 199
|||||||||||.|||||||||..|.||.|.|.||||.||.||..|.||||
RBAM_025070__ 150 GCCTGCCGAATATTTTGCAGGGTTCTTCGGGGACATAAAAGACCTGAAAA 199
BSNT_04068___ 200 ACACATACAAAGAAAACGAGCGTCTAAGAGAAAAACTTGACGGACAGACA 249
||||.|||||.||||||||.||..|||||.||||.||.||||||||||||
RBAM_025070__ 200 ACACGTACAAGGAAAACGAACGCTTAAGACAAAAGCTGGACGGACAGACA 249
BSNT_04068___ 250 CAATATGAAGCCAAGCTTCAAGAGCTTGAAGAAGAAAACA--AATCCTTG 297
|||||||||||.|||||.|||||.||..||||.||||||| ||.| ||
RBAM_025070__ 250 CAATATGAAGCGAAGCTCCAAGAACTCAAAGATGAAAACAAGAAGC--TG 297
BSNT_04068___ 298 CGTGACGAGCTTGGCCATGTCAAATCGATTAAAGATTACAAGCCGATTTT 347
|||||.||.||.||.|||||||||||.|||...||.||..|.||||||||
RBAM_025070__ 298 CGTGATGAACTCGGGCATGTCAAATCAATTTCCGACTATGATCCGATTTT 347
BSNT_04068___ 348 AGCAACGGTCATCGCCAGAAGCCCTGATAATTGGGCCAAACAGGTCACCA 397
|||.||.||.||||||||||.|||||||.|.|||..|||.|||.|||..|
RBAM_025070__ 348 AGCGACCGTTATCGCCAGAAACCCTGATCAATGGTACAAGCAGATCATGA 397
BSNT_04068___ 398 TTAACAAGGGGACTCAGCAAAACGTAGCGAAAGATATGGCCGTTACAAAC 447
|.||.|||||.||..||||.||.||.||.|||||.|||||.||.||.|||
RBAM_025070__ 398 TCAATAAGGGAACGAAGCAGAAAGTGGCCAAAGACATGGCTGTCACGAAC 447
BSNT_04068___ 448 GAAAAAGGCGCATTAATCGGCAAGATCAAAAGCTCCGGACTTAACAATTT 497
|||||.||.||..|..||||.||||||||||||..||||||.||||.|||
RBAM_025070__ 448 GAAAAGGGTGCGCTGGTCGGGAAGATCAAAAGCAGCGGACTCAACAGTTT 497
BSNT_04068___ 498 TACGTCTACTGTTCAGCTTTTAAGCGATACTGACCGCAATAACAGAGTCG 547
.||.||..|.||||||||..|.||||||..||||||||||||||||||.|
RBAM_025070__ 498 CACATCCGCCGTTCAGCTGCTGAGCGATGTTGACCGCAATAACAGAGTGG 547
BSNT_04068___ 548 CGACAAAAATTTCCGGAAAAAAAGGCAGCAAAGGCTACGGCTTGATCGAA 597
|.||.|||||.|||||.|||||.||.||||||||||||||.||.||.|||
RBAM_025070__ 548 CCACCAAAATCTCCGGCAAAAAGGGAAGCAAAGGCTACGGTTTAATTGAA 597
BSNT_04068___ 598 GGATATGACAAAGAGAAA-AAACGTCTTAAGATGACAATTATTGAGCGTA 646
||.|||||.|||.||||| |.|| |||.||.|||||.||..||||||...
RBAM_025070__ 598 GGGTATGATAAAAAGAAACAGAC-TCTGAAAATGACCATCCTTGAGCCGG 646
BSNT_04068___ 647 AGGATAAACAAGACGTGAAAAAAGGCGATCTTATTGAAACATCAGGGACA 696
|.||.||||..||.|||||||||||.||.||..|.||.|||||.||.||.
RBAM_025070__ 647 ATGAAAAACGTGAAGTGAAAAAAGGTGACCTCGTGGAGACATCCGGAACG 696
BSNT_04068___ 697 GGCGGTGTTTTCCCAGAAGGGCTGACAATCGGTGAAGTGACTGATATCGA 746
|||||.||.||.||..||||||||||..||||.||||||||.|||.|.||
RBAM_025070__ 697 GGCGGCGTATTTCCTCAAGGGCTGACGGTCGGGGAAGTGACCGATGTAGA 746
BSNT_04068___ 747 GTCAGATTCCTATGGACTGACGAAGGTTGCTTATGTAAAACCCGCGGCTG 796
.||||||.|.||.||.||||||||..|.|||||.||.|||||.||.||.|
RBAM_025070__ 747 ATCAGATGCTTACGGCCTGACGAAAATCGCTTACGTGAAACCGGCTGCCG 796
BSNT_04068___ 797 ACCT-TACAGATTTAAATAATGTGATCGTTGTTAACCGTGACGT-GCCGA 844
|.|| ||| |||.|..|..||||.|||||.||.|||||...||| ||
RBAM_025070__ 797 ATCTGTAC-GATCTTGACCATGTCATCGTCGTGAACCGAAGCGTAGC--- 842
BSNT_04068___ 845 CTGTCGATACAGAGGAGGAAGGATCGTGA 873
.||||.||||||||||||||||
RBAM_025070__ 843 -------AACAGGGGAGGAAGGATCGTGA 864
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