Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04068 and RBAM_025070

See Amino acid alignment / Visit BSNT_04068 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_04068___mreC.1.9828.seq
#    -bsequence dna-align/RBAM_025070___mreC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04068___mreC-RBAM_025070___mreC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04068___mreC-RBAM_025070___mreC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04068___mreC
# 2: RBAM_025070___mreC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 879
# Identity:     690/879 (78.5%)
# Similarity:   690/879 (78.5%)
# Gaps:          21/879 ( 2.4%)
# Score: 2672.5
# 
#
#=======================================

BSNT_04068___      1 ATGCCGAATAAGCGGTTAATGCTATTACTTCTGTGTATTATCATATTGGT     50
                     ||||||||.||.||||||||||||||||||||||||||||||||||||||
RBAM_025070__      1 ATGCCGAACAAACGGTTAATGCTATTACTTCTGTGTATTATCATATTGGT     50

BSNT_04068___     51 GGCTATGATTGGATTTTCGCTGAAGGGCGGCCGCAATACCACCTGGCCTG    100
                     |||||||||||||||.|||||||||..||||||.||||||||||||||||
RBAM_025070__     51 GGCTATGATTGGATTCTCGCTGAAGAACGGCCGTAATACCACCTGGCCTG    100

BSNT_04068___    101 AGAAAG-TGATCGGCGATACGACGGGAGTATTTCAAAATATTTTTCATAC    149
                     | |||| |||||||.|||||||||||||||||||||||.||||||||.||
RBAM_025070__    101 A-AAAGCTGATCGGTGATACGACGGGAGTATTTCAAAACATTTTTCACAC    149

BSNT_04068___    150 GCCTGCCGAATTTTTTGCAGGAATATTTGAGAACATCAATGATTTAAAAA    199
                     |||||||||||.|||||||||..|.||.|.|.||||.||.||..|.||||
RBAM_025070__    150 GCCTGCCGAATATTTTGCAGGGTTCTTCGGGGACATAAAAGACCTGAAAA    199

BSNT_04068___    200 ACACATACAAAGAAAACGAGCGTCTAAGAGAAAAACTTGACGGACAGACA    249
                     ||||.|||||.||||||||.||..|||||.||||.||.||||||||||||
RBAM_025070__    200 ACACGTACAAGGAAAACGAACGCTTAAGACAAAAGCTGGACGGACAGACA    249

BSNT_04068___    250 CAATATGAAGCCAAGCTTCAAGAGCTTGAAGAAGAAAACA--AATCCTTG    297
                     |||||||||||.|||||.|||||.||..||||.|||||||  ||.|  ||
RBAM_025070__    250 CAATATGAAGCGAAGCTCCAAGAACTCAAAGATGAAAACAAGAAGC--TG    297

BSNT_04068___    298 CGTGACGAGCTTGGCCATGTCAAATCGATTAAAGATTACAAGCCGATTTT    347
                     |||||.||.||.||.|||||||||||.|||...||.||..|.||||||||
RBAM_025070__    298 CGTGATGAACTCGGGCATGTCAAATCAATTTCCGACTATGATCCGATTTT    347

BSNT_04068___    348 AGCAACGGTCATCGCCAGAAGCCCTGATAATTGGGCCAAACAGGTCACCA    397
                     |||.||.||.||||||||||.|||||||.|.|||..|||.|||.|||..|
RBAM_025070__    348 AGCGACCGTTATCGCCAGAAACCCTGATCAATGGTACAAGCAGATCATGA    397

BSNT_04068___    398 TTAACAAGGGGACTCAGCAAAACGTAGCGAAAGATATGGCCGTTACAAAC    447
                     |.||.|||||.||..||||.||.||.||.|||||.|||||.||.||.|||
RBAM_025070__    398 TCAATAAGGGAACGAAGCAGAAAGTGGCCAAAGACATGGCTGTCACGAAC    447

BSNT_04068___    448 GAAAAAGGCGCATTAATCGGCAAGATCAAAAGCTCCGGACTTAACAATTT    497
                     |||||.||.||..|..||||.||||||||||||..||||||.||||.|||
RBAM_025070__    448 GAAAAGGGTGCGCTGGTCGGGAAGATCAAAAGCAGCGGACTCAACAGTTT    497

BSNT_04068___    498 TACGTCTACTGTTCAGCTTTTAAGCGATACTGACCGCAATAACAGAGTCG    547
                     .||.||..|.||||||||..|.||||||..||||||||||||||||||.|
RBAM_025070__    498 CACATCCGCCGTTCAGCTGCTGAGCGATGTTGACCGCAATAACAGAGTGG    547

BSNT_04068___    548 CGACAAAAATTTCCGGAAAAAAAGGCAGCAAAGGCTACGGCTTGATCGAA    597
                     |.||.|||||.|||||.|||||.||.||||||||||||||.||.||.|||
RBAM_025070__    548 CCACCAAAATCTCCGGCAAAAAGGGAAGCAAAGGCTACGGTTTAATTGAA    597

BSNT_04068___    598 GGATATGACAAAGAGAAA-AAACGTCTTAAGATGACAATTATTGAGCGTA    646
                     ||.|||||.|||.||||| |.|| |||.||.|||||.||..||||||...
RBAM_025070__    598 GGGTATGATAAAAAGAAACAGAC-TCTGAAAATGACCATCCTTGAGCCGG    646

BSNT_04068___    647 AGGATAAACAAGACGTGAAAAAAGGCGATCTTATTGAAACATCAGGGACA    696
                     |.||.||||..||.|||||||||||.||.||..|.||.|||||.||.||.
RBAM_025070__    647 ATGAAAAACGTGAAGTGAAAAAAGGTGACCTCGTGGAGACATCCGGAACG    696

BSNT_04068___    697 GGCGGTGTTTTCCCAGAAGGGCTGACAATCGGTGAAGTGACTGATATCGA    746
                     |||||.||.||.||..||||||||||..||||.||||||||.|||.|.||
RBAM_025070__    697 GGCGGCGTATTTCCTCAAGGGCTGACGGTCGGGGAAGTGACCGATGTAGA    746

BSNT_04068___    747 GTCAGATTCCTATGGACTGACGAAGGTTGCTTATGTAAAACCCGCGGCTG    796
                     .||||||.|.||.||.||||||||..|.|||||.||.|||||.||.||.|
RBAM_025070__    747 ATCAGATGCTTACGGCCTGACGAAAATCGCTTACGTGAAACCGGCTGCCG    796

BSNT_04068___    797 ACCT-TACAGATTTAAATAATGTGATCGTTGTTAACCGTGACGT-GCCGA    844
                     |.|| ||| |||.|..|..||||.|||||.||.|||||...||| ||   
RBAM_025070__    797 ATCTGTAC-GATCTTGACCATGTCATCGTCGTGAACCGAAGCGTAGC---    842

BSNT_04068___    845 CTGTCGATACAGAGGAGGAAGGATCGTGA    873
                            .||||.||||||||||||||||
RBAM_025070__    843 -------AACAGGGGAGGAAGGATCGTGA    864


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