Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04059 and RBAM_025000

See DNA alignment / Visit BSNT_04059 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_04059___ysxB.1.9828.seq
#    -bsequence pep-align/RBAM_025000___ysxB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04059___ysxB-RBAM_025000___ysxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04059___ysxB-RBAM_025000___ysxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04059___ysxB
# 2: RBAM_025000___ysxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      93/113 (82.3%)
# Similarity:   102/113 (90.3%)
# Gaps:           1/113 ( 0.9%)
# Score: 462.0
# 
#
#=======================================

BSNT_04059___      1 MIQATIRRS-HDKGILSFEMTGHANFAEHGQDLVCAGVTAVVFGAVNAVI     49
                     ||:|||||| :|.|||||||||||:|||||:|||||||||||||||||||
RBAM_025000__      1 MIEATIRRSRNDGGILSFEMTGHADFAEHGRDLVCAGVTAVVFGAVNAVI     50

BSNT_04059___     50 VLAGFEPLLDIGEDGGYFYFEFPESLDPEARQKAQLLIEGMIVSLETIER     99
                     .||..||:||||||||||||||||:.|.||.|||||||||||||||||||
RBAM_025000__     51 ALAPLEPILDIGEDGGYFYFEFPEAADQEALQKAQLLIEGMIVSLETIER    100

BSNT_04059___    100 DYKDNLRVTTNII    112
                     ||.::||:|.|.|
RBAM_025000__    101 DYSEHLRLTANQI    113


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