Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04054 and RBAM_024970
See
DNA alignment /
Visit
BSNT_04054 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence pep-align/BSNT_04054___obgE.1.9828.seq
# -bsequence pep-align/RBAM_024970___obgE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04054___obgE-RBAM_024970___obgE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04054___obgE-RBAM_024970___obgE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: RBAM_024970___obgE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity: 406/428 (94.9%)
# Similarity: 422/428 (98.6%)
# Gaps: 0/428 ( 0.0%)
# Score: 2132.0
#
#
#=======================================
BSNT_04054___ 1 MFVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDE 50
|||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_024970__ 1 MFVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGNGGDVVFEVDE 50
BSNT_04054___ 51 GLRTLMDFRYKKHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDT 100
||||||||||::||||||||||||||||||||||||:|||||||||||||
RBAM_024970__ 51 GLRTLMDFRYQRHFKAIRGEHGMSKNQHGRNADDMVVKVPPGTVVTDDDT 100
BSNT_04054___ 101 KQVIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLSENGEPGKERY 150
|||||||||||||||||:||||||||:||||||||||||||:||||||||
RBAM_024970__ 101 KQVIADLTEHGQRAVIAKGGRGGRGNTRFATPANPAPQLSEHGEPGKERY 150
BSNT_04054___ 151 IVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMV 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024970__ 151 IVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMV 200
BSNT_04054___ 201 ETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLE 250
|||||||||||||||||||||:|||||||||||||||||||||||||.:|
RBAM_024970__ 201 ETDDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIVHVIDMSAME 250
BSNT_04054___ 251 GRDPYDDYLTINQELSEYNLRLTERPQIIVANKMDMPEAAENLEAFKEKL 300
|||||:||:||||||||||||||||||||||||||||||||||:||||||
RBAM_024970__ 251 GRDPYEDYVTINQELSEYNLRLTERPQIIVANKMDMPEAAENLKAFKEKL 300
BSNT_04054___ 301 TDDYPVFPISAVTREGLRELLFEVANQLENTPEFPLYDEEELTQNRVMYT 350
.||:||||||||||||||:||||||||||.||||||||||||.:||||||
RBAM_024970__ 301 QDDHPVFPISAVTREGLRDLLFEVANQLETTPEFPLYDEEELAENRVMYT 350
BSNT_04054___ 351 MENEEVPFNITRDPDGVFVLSGDSLERLFKMTDFSRDESVKRFARQMRGM 400
||:||:||||||||||.|||||||||||||||||||||||||||||||||
RBAM_024970__ 351 MEDEEIPFNITRDPDGAFVLSGDSLERLFKMTDFSRDESVKRFARQMRGM 400
BSNT_04054___ 401 GVDEALRERGAKDGDIIRLLEFEFEFID 428
||||||||||||||||||||||||||||
RBAM_024970__ 401 GVDEALRERGAKDGDIIRLLEFEFEFID 428
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.