Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04054 and RBAM_024970

See Amino acid alignment / Visit BSNT_04054 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence dna-align/BSNT_04054___obgE.1.9828.seq
#    -bsequence dna-align/RBAM_024970___obgE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04054___obgE-RBAM_024970___obgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04054___obgE-RBAM_024970___obgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: RBAM_024970___obgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1289
# Identity:    1079/1289 (83.7%)
# Similarity:  1079/1289 (83.7%)
# Gaps:           4/1289 ( 0.3%)
# Score: 4531.0
# 
#
#=======================================

BSNT_04054___      1 ATGTTTGTAGATCAGGTCAAAGTATATGTAAAAGGCGGCGACGGCGGCAA     50
                     |||||||||||||||||.|||||||||||||||||||||||||||||.||
RBAM_024970__      1 ATGTTTGTAGATCAGGTGAAAGTATATGTAAAAGGCGGCGACGGCGGTAA     50

BSNT_04054___     51 CGGTATGGTTGCGTTTCGCCGTGAAAAATATGTGCCGAAAGGCGGCCCTG    100
                     |||.|||||||||||.|||||||||||||||||||||||||||||.||||
RBAM_024970__     51 CGGAATGGTTGCGTTCCGCCGTGAAAAATATGTGCCGAAAGGCGGGCCTG    100

BSNT_04054___    101 CCGGCGGTGACGGAGGAAAGGGAGGAGACGTCGTTTTTGAAGTAGATGAA    150
                     ||||||||||||||||.||.|||||.||||||||||||||.||.||||||
RBAM_024970__    101 CCGGCGGTGACGGAGGTAATGGAGGCGACGTCGTTTTTGAGGTTGATGAA    150

BSNT_04054___    151 GGTCTCCGCACCCTGATGGATTTTAGATACAAAAAACACTTTAAAGCGAT    200
                     ||.||.|||||.||.|||||.||..|.|||.|....||.||.||||||||
RBAM_024970__    151 GGACTGCGCACGCTCATGGACTTCCGGTACCAGCGGCATTTCAAAGCGAT    200

BSNT_04054___    201 TCGCGGCGAGCATGGCATGTCCAAAAACCAGCACGGACGAAATGCTGATG    250
                     .|||||||||||.||||||||.||||||||||||||..|||||||.||.|
RBAM_024970__    201 ACGCGGCGAGCACGGCATGTCTAAAAACCAGCACGGCAGAAATGCGGACG    250

BSNT_04054___    251 ATATGGTCATTAAAGTTCCGCCGGGCACCGTTGTGACAGACGATGATACG    300
                     |||||||..|||||||||||||.|||||.||.||.||.||.||.|||||.
RBAM_024970__    251 ATATGGTTGTTAAAGTTCCGCCCGGCACAGTCGTAACGGATGACGATACA    300

BSNT_04054___    301 AAACAGGTCATCGCTGATTTAACAGAGCACGGACAGCGGGCTGTCATTGC    350
                     |||||||||||.||.|||.|.||.|||||.||.|||||.||.|||||.||
RBAM_024970__    301 AAACAGGTCATTGCCGATCTGACTGAGCATGGGCAGCGTGCCGTCATCGC    350

BSNT_04054___    351 AAGAGGCGGAAGAGGCGGAAGAGGAAATAGCCGCTTTGCTACACCGGCTA    400
                     ||.|||||||.|.||||||.|.|||||||.|||||||||.||||||||.|
RBAM_024970__    351 AAAAGGCGGACGCGGCGGACGCGGAAATACCCGCTTTGCGACACCGGCCA    400

BSNT_04054___    401 ATCCCGCGCCTCAGCTTTCAGAAAACGGCGAGCCGGGAAAAGAACGCTAC    450
                     |.||.||.||.|||||.|||||..||||.|||||.||||||||.|||||.
RBAM_024970__    401 ACCCGGCACCGCAGCTGTCAGAGCACGGAGAGCCCGGAAAAGAGCGCTAT    450

BSNT_04054___    451 ATTGTTCTTGAATTAAAAGTGCTTGCAGATGTCGGACTTGTCGGGTTCCC    500
                     ||.||.||||||.|.||||||||||||||.||.||.||.|||||.|||||
RBAM_024970__    451 ATCGTGCTTGAACTGAAAGTGCTTGCAGACGTAGGTCTCGTCGGCTTCCC    500

BSNT_04054___    501 GAGTGTGGGAAAATCTACTTTGCTGTCTGTTGTCTCATCTGCAAAACCGA    550
                     |||.||.|||||||||||..|.||||||||.||.|||||.|||||.||||
RBAM_024970__    501 GAGCGTCGGAAAATCTACGCTTCTGTCTGTCGTTTCATCGGCAAAGCCGA    550

BSNT_04054___    551 AAATTGCGGACTATCACTTTACAACGCTTGTCCCAAATCTCGGCATGGTT    600
                     ||||.||.||.|||||.||||||||||||||.||.|||||.||||||||.
RBAM_024970__    551 AAATCGCCGATTATCATTTTACAACGCTTGTTCCGAATCTGGGCATGGTG    600

BSNT_04054___    601 GAAACGGATGACGGACGCAGCTTTGTCATGGCCGATTTGCCGGGGCTGAT    650
                     |||||||||||||||.|.|||||.||||||||.|||.||||.||..||||
RBAM_024970__    601 GAAACGGATGACGGAAGAAGCTTCGTCATGGCGGATCTGCCCGGTTTGAT    650

BSNT_04054___    651 TGAAGGCGCACACCAAGGCGTCGGACTT-GGCCACCAGTTTTTGCGCCAT    699
                     ||||||.||.||..||||.||||| ||| ||||||||.|||.|.||||||
RBAM_024970__    651 TGAAGGAGCGCATGAAGGAGTCGG-CTTAGGCCACCAATTTCTCCGCCAT    699

BSNT_04054___    700 ATTGAACGGACGAGGGTTATTGTTCATGTCATTGACATGTCAGGCTTAGA    749
                     ||.|||||||||.|.||.||.|||||.||||||||||||||||...|.||
RBAM_024970__    700 ATCGAACGGACGCGCGTCATCGTTCACGTCATTGACATGTCAGCGATGGA    749

BSNT_04054___    750 AGGCCGTGATCCATATGATGATTATCTTACGATTAACCAGGAGCTGAGCG    799
                     ||||||||||||.|||||.||||||.|.||.|||||.||||||||.||.|
RBAM_024970__    750 AGGCCGTGATCCGTATGAGGATTATGTCACCATTAATCAGGAGCTCAGTG    799

BSNT_04054___    800 AGTACAATCTGCGTCTCACTGAGCGTCCGCAAATTATCGTTGCAAATAAA    849
                     |.||.||||||||.||.||.|||||||||||||||||||||||.||||||
RBAM_024970__    800 AATATAATCTGCGGCTGACGGAGCGTCCGCAAATTATCGTTGCGAATAAA    849

BSNT_04054___    850 ATGGACATGCCGGAGGCTGCGGAAAATCTCGAAGCCTTTAAAGAAAAGCT    899
                     |||||||||||.||.||.||.||||||||..||||.||||||||||||||
RBAM_024970__    850 ATGGACATGCCCGAAGCGGCTGAAAATCTTAAAGCGTTTAAAGAAAAGCT    899

BSNT_04054___    900 GACGGATGATTATCCGGTATTCCCGATCAGTGCGGTGACAAGAGAAGGTC    949
                     ...||||||..||||.||.|||||||||||.||||||||.||||||||.|
RBAM_024970__    900 TCAGGATGACCATCCTGTCTTCCCGATCAGCGCGGTGACGAGAGAAGGGC    949

BSNT_04054___    950 TGCGTGAGCTTCTGTTTGAGGTTGCCAATCAGCTTGAGAAC-ACACCGGA    998
                     |.||.||.|||||||||||.||.|||||.|||||.|| ||| ||.||.||
RBAM_024970__    950 TCCGCGATCTTCTGTTTGAAGTCGCCAACCAGCTGGA-AACAACGCCTGA    998

BSNT_04054___    999 ATTCCCGCTGTATGACGAGGAAGAGCTTACACAAAACCGTGTCATGTACA   1048
                     |||||||||||||||.||.|||||.||..|..|||||||.||.|||||||
RBAM_024970__    999 ATTCCCGCTGTATGATGAAGAAGAACTGGCGGAAAACCGCGTAATGTACA   1048

BSNT_04054___   1049 CGATGGAAAATGAAGAAGTGCCATTTAACATTACACGCGATCCAGACGGT   1098
                     ||||||||.|.||||||.|.||||||||||||||.||.|||||.||||||
RBAM_024970__   1049 CGATGGAAGACGAAGAAATTCCATTTAACATTACCCGTGATCCGGACGGT   1098

BSNT_04054___   1099 GTATTTGTGCTTTCAGGAGACAGCCTTGAGCGGTTATTCAAGATGACTGA   1148
                     |..||||||||||||||.|||||.||.||.||..|.||.||.||||||||
RBAM_024970__   1099 GCGTTTGTGCTTTCAGGTGACAGTCTGGAACGCCTCTTTAAAATGACTGA   1148

BSNT_04054___   1149 TTTCTCACGTGATGAATCGGTTAAACGGTTTGCAAGACAGATGCGCGGAA   1198
                     ||||||.|||||.|||||.||.||.||.||||||||||||||||||||.|
RBAM_024970__   1149 TTTCTCCCGTGACGAATCCGTCAAGCGTTTTGCAAGACAGATGCGCGGTA   1198

BSNT_04054___   1199 TGGGTGTTGATGAAGCACTCAGAGAACGCGGAGCCAAGGATGGAGATATA   1248
                     ||||.|||||||||||.||||||||||||||.||.||.||.||.|||||.
RBAM_024970__   1199 TGGGCGTTGATGAAGCGCTCAGAGAACGCGGTGCTAAAGACGGCGATATC   1248

BSNT_04054___   1249 ATCAGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA   1287
                     |||.|||||||||||||||||||||||||||||||||||
RBAM_024970__   1249 ATCCGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA   1287


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