Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04054 and RBAM_024970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_04054___obgE.1.9828.seq
# -bsequence dna-align/RBAM_024970___obgE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04054___obgE-RBAM_024970___obgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04054___obgE-RBAM_024970___obgE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: RBAM_024970___obgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1289
# Identity: 1079/1289 (83.7%)
# Similarity: 1079/1289 (83.7%)
# Gaps: 4/1289 ( 0.3%)
# Score: 4531.0
#
#
#=======================================
BSNT_04054___ 1 ATGTTTGTAGATCAGGTCAAAGTATATGTAAAAGGCGGCGACGGCGGCAA 50
|||||||||||||||||.|||||||||||||||||||||||||||||.||
RBAM_024970__ 1 ATGTTTGTAGATCAGGTGAAAGTATATGTAAAAGGCGGCGACGGCGGTAA 50
BSNT_04054___ 51 CGGTATGGTTGCGTTTCGCCGTGAAAAATATGTGCCGAAAGGCGGCCCTG 100
|||.|||||||||||.|||||||||||||||||||||||||||||.||||
RBAM_024970__ 51 CGGAATGGTTGCGTTCCGCCGTGAAAAATATGTGCCGAAAGGCGGGCCTG 100
BSNT_04054___ 101 CCGGCGGTGACGGAGGAAAGGGAGGAGACGTCGTTTTTGAAGTAGATGAA 150
||||||||||||||||.||.|||||.||||||||||||||.||.||||||
RBAM_024970__ 101 CCGGCGGTGACGGAGGTAATGGAGGCGACGTCGTTTTTGAGGTTGATGAA 150
BSNT_04054___ 151 GGTCTCCGCACCCTGATGGATTTTAGATACAAAAAACACTTTAAAGCGAT 200
||.||.|||||.||.|||||.||..|.|||.|....||.||.||||||||
RBAM_024970__ 151 GGACTGCGCACGCTCATGGACTTCCGGTACCAGCGGCATTTCAAAGCGAT 200
BSNT_04054___ 201 TCGCGGCGAGCATGGCATGTCCAAAAACCAGCACGGACGAAATGCTGATG 250
.|||||||||||.||||||||.||||||||||||||..|||||||.||.|
RBAM_024970__ 201 ACGCGGCGAGCACGGCATGTCTAAAAACCAGCACGGCAGAAATGCGGACG 250
BSNT_04054___ 251 ATATGGTCATTAAAGTTCCGCCGGGCACCGTTGTGACAGACGATGATACG 300
|||||||..|||||||||||||.|||||.||.||.||.||.||.|||||.
RBAM_024970__ 251 ATATGGTTGTTAAAGTTCCGCCCGGCACAGTCGTAACGGATGACGATACA 300
BSNT_04054___ 301 AAACAGGTCATCGCTGATTTAACAGAGCACGGACAGCGGGCTGTCATTGC 350
|||||||||||.||.|||.|.||.|||||.||.|||||.||.|||||.||
RBAM_024970__ 301 AAACAGGTCATTGCCGATCTGACTGAGCATGGGCAGCGTGCCGTCATCGC 350
BSNT_04054___ 351 AAGAGGCGGAAGAGGCGGAAGAGGAAATAGCCGCTTTGCTACACCGGCTA 400
||.|||||||.|.||||||.|.|||||||.|||||||||.||||||||.|
RBAM_024970__ 351 AAAAGGCGGACGCGGCGGACGCGGAAATACCCGCTTTGCGACACCGGCCA 400
BSNT_04054___ 401 ATCCCGCGCCTCAGCTTTCAGAAAACGGCGAGCCGGGAAAAGAACGCTAC 450
|.||.||.||.|||||.|||||..||||.|||||.||||||||.|||||.
RBAM_024970__ 401 ACCCGGCACCGCAGCTGTCAGAGCACGGAGAGCCCGGAAAAGAGCGCTAT 450
BSNT_04054___ 451 ATTGTTCTTGAATTAAAAGTGCTTGCAGATGTCGGACTTGTCGGGTTCCC 500
||.||.||||||.|.||||||||||||||.||.||.||.|||||.|||||
RBAM_024970__ 451 ATCGTGCTTGAACTGAAAGTGCTTGCAGACGTAGGTCTCGTCGGCTTCCC 500
BSNT_04054___ 501 GAGTGTGGGAAAATCTACTTTGCTGTCTGTTGTCTCATCTGCAAAACCGA 550
|||.||.|||||||||||..|.||||||||.||.|||||.|||||.||||
RBAM_024970__ 501 GAGCGTCGGAAAATCTACGCTTCTGTCTGTCGTTTCATCGGCAAAGCCGA 550
BSNT_04054___ 551 AAATTGCGGACTATCACTTTACAACGCTTGTCCCAAATCTCGGCATGGTT 600
||||.||.||.|||||.||||||||||||||.||.|||||.||||||||.
RBAM_024970__ 551 AAATCGCCGATTATCATTTTACAACGCTTGTTCCGAATCTGGGCATGGTG 600
BSNT_04054___ 601 GAAACGGATGACGGACGCAGCTTTGTCATGGCCGATTTGCCGGGGCTGAT 650
|||||||||||||||.|.|||||.||||||||.|||.||||.||..||||
RBAM_024970__ 601 GAAACGGATGACGGAAGAAGCTTCGTCATGGCGGATCTGCCCGGTTTGAT 650
BSNT_04054___ 651 TGAAGGCGCACACCAAGGCGTCGGACTT-GGCCACCAGTTTTTGCGCCAT 699
||||||.||.||..||||.||||| ||| ||||||||.|||.|.||||||
RBAM_024970__ 651 TGAAGGAGCGCATGAAGGAGTCGG-CTTAGGCCACCAATTTCTCCGCCAT 699
BSNT_04054___ 700 ATTGAACGGACGAGGGTTATTGTTCATGTCATTGACATGTCAGGCTTAGA 749
||.|||||||||.|.||.||.|||||.||||||||||||||||...|.||
RBAM_024970__ 700 ATCGAACGGACGCGCGTCATCGTTCACGTCATTGACATGTCAGCGATGGA 749
BSNT_04054___ 750 AGGCCGTGATCCATATGATGATTATCTTACGATTAACCAGGAGCTGAGCG 799
||||||||||||.|||||.||||||.|.||.|||||.||||||||.||.|
RBAM_024970__ 750 AGGCCGTGATCCGTATGAGGATTATGTCACCATTAATCAGGAGCTCAGTG 799
BSNT_04054___ 800 AGTACAATCTGCGTCTCACTGAGCGTCCGCAAATTATCGTTGCAAATAAA 849
|.||.||||||||.||.||.|||||||||||||||||||||||.||||||
RBAM_024970__ 800 AATATAATCTGCGGCTGACGGAGCGTCCGCAAATTATCGTTGCGAATAAA 849
BSNT_04054___ 850 ATGGACATGCCGGAGGCTGCGGAAAATCTCGAAGCCTTTAAAGAAAAGCT 899
|||||||||||.||.||.||.||||||||..||||.||||||||||||||
RBAM_024970__ 850 ATGGACATGCCCGAAGCGGCTGAAAATCTTAAAGCGTTTAAAGAAAAGCT 899
BSNT_04054___ 900 GACGGATGATTATCCGGTATTCCCGATCAGTGCGGTGACAAGAGAAGGTC 949
...||||||..||||.||.|||||||||||.||||||||.||||||||.|
RBAM_024970__ 900 TCAGGATGACCATCCTGTCTTCCCGATCAGCGCGGTGACGAGAGAAGGGC 949
BSNT_04054___ 950 TGCGTGAGCTTCTGTTTGAGGTTGCCAATCAGCTTGAGAAC-ACACCGGA 998
|.||.||.|||||||||||.||.|||||.|||||.|| ||| ||.||.||
RBAM_024970__ 950 TCCGCGATCTTCTGTTTGAAGTCGCCAACCAGCTGGA-AACAACGCCTGA 998
BSNT_04054___ 999 ATTCCCGCTGTATGACGAGGAAGAGCTTACACAAAACCGTGTCATGTACA 1048
|||||||||||||||.||.|||||.||..|..|||||||.||.|||||||
RBAM_024970__ 999 ATTCCCGCTGTATGATGAAGAAGAACTGGCGGAAAACCGCGTAATGTACA 1048
BSNT_04054___ 1049 CGATGGAAAATGAAGAAGTGCCATTTAACATTACACGCGATCCAGACGGT 1098
||||||||.|.||||||.|.||||||||||||||.||.|||||.||||||
RBAM_024970__ 1049 CGATGGAAGACGAAGAAATTCCATTTAACATTACCCGTGATCCGGACGGT 1098
BSNT_04054___ 1099 GTATTTGTGCTTTCAGGAGACAGCCTTGAGCGGTTATTCAAGATGACTGA 1148
|..||||||||||||||.|||||.||.||.||..|.||.||.||||||||
RBAM_024970__ 1099 GCGTTTGTGCTTTCAGGTGACAGTCTGGAACGCCTCTTTAAAATGACTGA 1148
BSNT_04054___ 1149 TTTCTCACGTGATGAATCGGTTAAACGGTTTGCAAGACAGATGCGCGGAA 1198
||||||.|||||.|||||.||.||.||.||||||||||||||||||||.|
RBAM_024970__ 1149 TTTCTCCCGTGACGAATCCGTCAAGCGTTTTGCAAGACAGATGCGCGGTA 1198
BSNT_04054___ 1199 TGGGTGTTGATGAAGCACTCAGAGAACGCGGAGCCAAGGATGGAGATATA 1248
||||.|||||||||||.||||||||||||||.||.||.||.||.|||||.
RBAM_024970__ 1199 TGGGCGTTGATGAAGCGCTCAGAGAACGCGGTGCTAAAGACGGCGATATC 1248
BSNT_04054___ 1249 ATCAGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA 1287
|||.|||||||||||||||||||||||||||||||||||
RBAM_024970__ 1249 ATCCGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA 1287
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