Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04053 and RBAM_024960

See DNA alignment / Visit BSNT_04053 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_04053___pheB.1.9828.seq
#    -bsequence pep-align/RBAM_024960___pheB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04053___pheB-RBAM_024960___pheB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04053___pheB-RBAM_024960___pheB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04053___pheB
# 2: RBAM_024960___pheB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     143/149 (96.0%)
# Similarity:   147/149 (98.7%)
# Gaps:           2/149 ( 1.3%)
# Score: 710.0
# 
#
#=======================================

BSNT_04053___      1 --MKEETFYLVREDVLPDAMRKTLEVKKLLDRKKADSVADAVQKVDLSRS     48
                       :||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_024960__      1 MQVKEETFYLVREDVLPDAMRKTLEVKKLLDRKKAESVADAVQKVDLSRS     50

BSNT_04053___     49 AFYKYRDAVFPFYTMVKEQIITLFFHLEDRSGALSQLLQAVADSGSNVLS     98
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024960__     51 AFYKYRDAVFPFYTMVKEQIITLFFHLEDRSGALSQLLQAVADSGSNVLS    100

BSNT_04053___     99 IHQTIPLQGRANVTLSISTSAMEEDIHTLMNKLRKFDFVEKVEILGSGA    147
                     ||||||||||||||||||||||||:|||||||||||||:||||||||||
RBAM_024960__    101 IHQTIPLQGRANVTLSISTSAMEENIHTLMNKLRKFDFIEKVEILGSGA    149


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