Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04053 and RBAM_024960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_04053___pheB.1.9828.seq
# -bsequence dna-align/RBAM_024960___pheB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04053___pheB-RBAM_024960___pheB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04053___pheB-RBAM_024960___pheB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04053___pheB
# 2: RBAM_024960___pheB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 374/450 (83.1%)
# Similarity: 374/450 (83.1%)
# Gaps: 6/450 ( 1.3%)
# Score: 1590.0
#
#
#=======================================
BSNT_04053___ 1 ------ATGAAAGAGGAGACATTTTATCTTGTCCGTGAAGATGTATTGCC 44
.|||||||.||||||||||||.|.||.||||||||.||..||||
RBAM_024960__ 1 GTGCAGGTGAAAGAAGAGACATTTTATTTAGTGCGTGAAGACGTTCTGCC 50
BSNT_04053___ 45 CGATGCAATGAGAAAAACATTAGAAGTCAAAAAGCTGCTTGATCGAAAAA 94
.|||||.|||.|.|||||..|.|||||||||||||||||.||..||||||
RBAM_024960__ 51 TGATGCGATGCGGAAAACCCTTGAAGTCAAAAAGCTGCTGGACAGAAAAA 100
BSNT_04053___ 95 AAGCAGATTCAGTAGCAGATGCCGTTCAAAAGGTCGATTTAAGCAGAAGT 144
|.||.||.||.||.|||||||||||.||.||.||.||||||||||||||.
RBAM_024960__ 101 AGGCTGAATCGGTTGCAGATGCCGTGCAGAAAGTTGATTTAAGCAGAAGC 150
BSNT_04053___ 145 GCGTTTTATAAATACAGGGATGCTGTTTTTCCATTCTACACCATGGTAAA 194
||.|||||.||||||.|.|||||.|||||.||.||.|||||.|||||.||
RBAM_024960__ 151 GCTTTTTACAAATACCGAGATGCGGTTTTCCCTTTTTACACGATGGTTAA 200
BSNT_04053___ 195 AGAACAAATTATCACACTTTTCTTTCATTTGGAGGATAGGTCAGGTGCGT 244
|||||||||.|||||||||||||||||||||||||||.|||||||.||||
RBAM_024960__ 201 AGAACAAATAATCACACTTTTCTTTCATTTGGAGGATCGGTCAGGCGCGT 250
BSNT_04053___ 245 TATCTCAGCTTCTTCAGGCGGTAGCTGATTCTGGAAGCAACGTTCTTTCC 294
||||.||||||.|.||||||||.|||||.||.|||||||||||.||||||
RBAM_024960__ 251 TATCCCAGCTTTTGCAGGCGGTGGCTGACTCAGGAAGCAACGTGCTTTCC 300
BSNT_04053___ 295 ATTCACCAGACCATTCCGCTTCAAGGCAGAGCAAATGTGACACTGTCTAT 344
|||||||||||.|||||||||||.|||||.||.|||||.||.||.||.||
RBAM_024960__ 301 ATTCACCAGACGATTCCGCTTCAGGGCAGGGCGAATGTCACGCTCTCAAT 350
BSNT_04053___ 345 CAGTACGTCGGCAATGGAAGAAGACATTCATACATTAATGAATAAGCTCA 394
|||||||||.||||||||||||.||||||||||.|||||||||||.||.|
RBAM_024960__ 351 CAGTACGTCCGCAATGGAAGAAAACATTCATACGTTAATGAATAAACTGA 400
BSNT_04053___ 395 GGAAGTTTGATTTTGTAGAAAAGGTTGAAATATTAGGTTCAGGTGCATAA 444
|.||.|||||||||.|||||||.|||||.||.|||||.|||||.||.|||
RBAM_024960__ 401 GAAAATTTGATTTTATAGAAAAAGTTGAGATCTTAGGGTCAGGCGCGTAA 450
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