Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04046 and RBAM_024910

See DNA alignment / Visit BSNT_04046 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence pep-align/BSNT_04046___nadC.1.9828.seq
#    -bsequence pep-align/RBAM_024910___nadC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04046___nadC-RBAM_024910___nadC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04046___nadC-RBAM_024910___nadC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04046___nadC
# 2: RBAM_024910___nadC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     200/289 (69.2%)
# Similarity:   242/289 (83.7%)
# Gaps:           7/289 ( 2.4%)
# Score: 1039.5
# 
#
#=======================================

BSNT_04046___      1 MNHLQLKKLLNHFFLEDIGTGDLTSQSIFGEQSCEAEIVAKSEGIFAGAA     50
                     |:.||||::|.|||.|||||||:|||:||.:|.|:|.|:.|::|:|||.|
RBAM_024910__      1 MDILQLKQMLTHFFQEDIGTGDVTSQAIFSDQQCKARIITKTDGVFAGEA     50

BSNT_04046___     51 IIKEGFSLLDENVRIILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLN    100
                     :|:||:.||.:::||...||||:.:.||:|:||:.|.|||||:||||:||
RBAM_024910__     51 VIREGWKLLHDDIRIRSLKKDGERMKKGDVLAEIEGQAAALLTGERVILN    100

BSNT_04046___    101 LIQRLSGIATMTREAVRCLDDEQIKICDTRKTTPGLRMLEKYAVRAGGGY    150
                     ||||:|||||||.||.|.|||..||:|||||||||||||||||||.|||:
RBAM_024910__    101 LIQRMSGIATMTDEAKRRLDDPSIKLCDTRKTTPGLRMLEKYAVRVGGGF    150

BSNT_04046___    151 NHRFGLYDGIMIKDNHIAACGSILEACKKARQAAGHMVNIEVEIETEGQL    200
                     |||||||||||||||||||||||..|.::||:.||.|:.:|||||:|.||
RBAM_024910__    151 NHRFGLYDGIMIKDNHIAACGSIRAAMERARKTAGQMLAVEVEIESEQQL    200

BSNT_04046___    201 REAIAAGADVIMFDNCPPDTVRHFAKLTPDHIKTEASGGITLESLPAFKG    250
                     .|||.|||||||||||||::||.||.:||.||||||||||||::|||:||
RBAM_024910__    201 LEAIEAGADVIMFDNCPPESVRRFAGMTPGHIKTEASGGITLDTLPAYKG    250

BSNT_04046___    251 TGVNYISLGFLTHSVKSLDISMDVTLSNESVEECRYVNS    289
                     |||.|||||||||||||.||||||    |:.|:..:   
RBAM_024910__    251 TGVQYISLGFLTHSVKSADISMDV----EAAEQGDF---    282


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