Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04046 and RBAM_024910
See
Amino acid alignment /
Visit
BSNT_04046 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04046___nadC.1.9828.seq
# -bsequence dna-align/RBAM_024910___nadC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04046___nadC-RBAM_024910___nadC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04046___nadC-RBAM_024910___nadC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04046___nadC
# 2: RBAM_024910___nadC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 605/933 (64.8%)
# Similarity: 605/933 (64.8%)
# Gaps: 147/933 (15.8%)
# Score: 2012.5
#
#
#=======================================
BSNT_04046___ 1 ATGAATCATT-TACAGCTGAAAAAATTACTGAATCACTTTTTTCTTGAGG 49
|||.| |||| |.|||||||||.||.|.||||.|||.|||||||..||.|
RBAM_024910__ 1 ATGGA-CATTCTGCAGCTGAAACAAATGCTGACTCATTTTTTTCAGGAAG 49
BSNT_04046___ 50 ATATTGGGACAGGGGATCTTACATCGCAGTCTATTTTTGGAGAACAGAGC 99
||||.||.||.||.|||.|.||.||.||..|.||||||...||.|||...
RBAM_024910__ 50 ATATCGGAACGGGTGATGTCACGTCACAAGCGATTTTTTCTGATCAGCAA 99
BSNT_04046___ 100 TGTGAAGCG-GAGATTGTTGCAAAGTCAGAGGGTATTTTTGCAGGAGCAG 148
|||.||||| || ||..|..||||..||||.||..|.|||||.||||.||
RBAM_024910__ 100 TGTAAAGCGCGA-ATCATCACAAAAACAGACGGCGTGTTTGCCGGAGAAG 148
BSNT_04046___ 149 CGATCATAAAAGAAGGCTTTTCGTTATTGGACGAAAATGTTCGAATCATT 198
| |||||| .||..||.|.|.|||.| ||
RBAM_024910__ 149 C--------------------CGTTAT---CCGTGAAGGATGGAAGC-TT 174
BSNT_04046___ 199 TTACAC------------------------AAAAAAGATGGGGACATGTT 224
|||||| ||||||||.||.||...|.|
RBAM_024910__ 175 TTACACGATGACATCCGCATCCGCTCCCTGAAAAAAGACGGAGAACGGAT 224
BSNT_04046___ 225 GCATAAAGGTGAAGTGATTGCCGAGTTACACGGTCCCGCAGCTGCGCTCC 274
|.|.|||||.||.|||.|.||.||..||.|.||.|..||.||.||.||.|
RBAM_024910__ 225 GAAAAAAGGAGACGTGCTCGCTGAAATAGAAGGCCAGGCGGCGGCTCTTC 274
BSNT_04046___ 275 TTTCAGGAGAGCGGGTCGTATTAAATCTTATTCAGAGGCTGTCAGGAATT 324
||.|.||.|||||||||.|..|.|||||.||.||.||..|||||||.|||
RBAM_024910__ 275 TTACGGGGGAGCGGGTCATTCTGAATCTCATACAAAGAATGTCAGGCATT 324
BSNT_04046___ 325 GCGACAATGAC--AAGAG------AGGCTGTTCGGTGTCTGGATGATGAA 366
||||||||||| |.||| |||| |||| ||||||.
RBAM_024910__ 325 GCGACAATGACGGATGAGGCCAAAAGGC--------GTCT---TGATGAT 363
BSNT_04046___ 367 CAG---ATTAAAATTTGTGACACGAGAAAAACAACACCGGGGCTCAGAAT 413
|.| ||.||..|||||||.|||||||||||.|||||.|||||||||||
RBAM_024910__ 364 CCGTCCATCAAGCTTTGTGATACGAGAAAAACGACACCCGGGCTCAGAAT 413
BSNT_04046___ 414 GCTGGAGAAATATGCTGTCAGAGCCGGCGGCGGGTATAATCATCGATTCG 463
||||||.|||||.||.||..|.|.|||.|||||.|.|||||||||.||||
RBAM_024910__ 414 GCTGGAAAAATACGCCGTTCGGGTCGGAGGCGGCTTTAATCATCGCTTCG 463
BSNT_04046___ 464 GTTTGTATGACGGCATCATGATTAAAGATAATCATATCGCAGCATGCGGC 513
|.||.|||||||||||||||||.||||||||||||||.||.||.|||||.
RBAM_024910__ 464 GCTTATATGACGGCATCATGATAAAAGATAATCATATTGCCGCCTGCGGA 513
BSNT_04046___ 514 TCTATTTTAGAGG-----CATGCA---------AAAAAGCCCGTCAGGCC 549
||.|| .||| ||||.| ||||| |.
RBAM_024910__ 514 TCGAT----AAGGGCGGCCATGGAGCGGGCAAGAAAAA----------CG 549
BSNT_04046___ 550 GCAGGGCACATGGTAAATATCGAGGTGGAAATTGAAA-------CGGAGG 592
||.|||||.||| .|.|.|||||||.|.|||| ||.|..
RBAM_024910__ 550 GCGGGGCAGATG------CTTGCGGTGGAAGTCGAAATCGAATCCGAACA 593
BSNT_04046___ 593 GACAGCTGCGGGAAGCAATTGCAGCTGGCGCGGATGTTATTATGTTTGAC 642
| |||||||..||.|||||.|.|||.||.||.||.|||||||||||||||
RBAM_024910__ 594 G-CAGCTGCTCGAGGCAATAGAAGCGGGTGCAGACGTTATTATGTTTGAC 642
BSNT_04046___ 643 AACTGTCCGCCTGATACGGTCCGTCATTTTGCAAAGCTCACACCGGATCA 692
||||||||||||||..|.|||||.|.|||||||....|.|||||||..||
RBAM_024910__ 643 AACTGTCCGCCTGAGTCCGTCCGGCGTTTTGCAGGTATGACACCGGGCCA 692
BSNT_04046___ 693 TATAAAAACTGAAGCCTCCGGCGGGATTACGTTAGAATCTTTGCCTGCTT 742
|||.|||||.|||||.|||||.||.||.|||.|.||..|.|||||.||||
RBAM_024910__ 693 TATCAAAACGGAAGCATCCGGAGGCATAACGCTCGACACGTTGCCCGCTT 742
BSNT_04046___ 743 TTAAAGGGACGGGTGTGAATTATATTTCATTAGGATTTCTGACTCATTCC 792
.||||||.|||||.||..|.|||||||||.|.|||||||||||||||||.
RBAM_024910__ 743 ATAAAGGAACGGGGGTCCAATATATTTCACTCGGATTTCTGACTCATTCA 792
BSNT_04046___ 793 GTCAAAAGTTTAGATATCAGCATGGATGTTACGTTATCAAATGAATCTGT 842
||.|||||....||.|||||||||||||| |||..|.|.
RBAM_024910__ 793 GTAAAAAGCGCCGACATCAGCATGGATGT------------TGAGGCAGC 830
BSNT_04046___ 843 GGA-----GGAATGCCGTTATGTCAATTCTTGA 870
||| ||.|| |.|.||
RBAM_024910__ 831 GGAACAGGGGGAT-------TTTTAA------- 849
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.