Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04044 and RBAM_024890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_04044___safA.1.9828.seq
# -bsequence pep-align/RBAM_024890___safA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04044___safA-RBAM_024890___safA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04044___safA-RBAM_024890___safA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04044___safA
# 2: RBAM_024890___safA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 237/446 (53.1%)
# Similarity: 270/446 (60.5%)
# Gaps: 99/446 (22.2%)
# Score: 1061.5
#
#
#=======================================
BSNT_04044___ 1 MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSE 50
||||||||||||||||||||||:||:||||.|||||||||||||||||||
RBAM_024890__ 1 MKIHIVQKGDSLWKIAEKYGVDLEELKKLNHQLSNPDLIMPGMKIKVPSE 50
BSNT_04044___ 51 GVPVRKEPKAGKSPAAGSVKQEHPYAKEKPKSVVDVEDTKPKE-KKSMPY 99
.||||||||||...:|. |.||||||||||||||:|||.|:| |.|:||
RBAM_024890__ 51 AVPVRKEPKAGFGTSAH--KHEHPYAKEKPKSVVDIEDTIPEEPKPSIPY 98
BSNT_04044___ 100 VPPMPNLQENVYPEADVNDYYDMKQLFQPWSPPKPEEP--------KKHH 141
|||:|...|||.||||:|.||...|||||||||||||| :|.|
RBAM_024890__ 99 VPPIPEKHENVLPEADMNQYYPSNQLFQPWSPPKPEEPVTHFVEPKEKEH 148
BSNT_04044___ 142 DGNMDHMYHMQDQFPQQEAMSNMENANYPNMPNMPKAPEVGGVEEENVHH 191
|.|: ||||.|.||||||| ||||||||.|.:||||..:
RBAM_024890__ 149 DNNI----------PQQEEMINMENANY---PNMPKAPEAGKMEEENAAY 185
BSNT_04044___ 192 TVPNMP---------MPAVQP-YYHYPAHFV--PCPVPVSPIFPGSGLCY 229
.:|||| ||||:| :.|||...: ||||||:|:.||||||:
RBAM_024890__ 186 HLPNMPNIPNVPFPNMPAVEPSFMHYPMPCMPCPCPVPVTPMLPGSGLCH 235
BSNT_04044___ 230 PYYPA-----------QAYPMHPM---HGY-QPGFVSPQYDPG-YENQHH 263
|.:|. ..:|:.|| :|: .||| .||...| ||||.|
RBAM_024890__ 236 PCFPVGGGFGGFGGGFGGFPVMPMPLPYGFHHPGF-GPQAGYGEYENQAH 284
BSNT_04044___ 264 ENSHHGHYGSYGAPQYASPAYGSPYGHMPYGPYYGTPQVMGAYQPAAAHG 313
||:.| :.|| ||...|:|||.| ||||. ..::...|.|.
RBAM_024890__ 285 ENAEH-YDGS------ASGFGGAPYGQM---PYYGG---YSSHYANAPHH 321
BSNT_04044___ 314 YMPYKDHDDCGCDGDHQPYFSAPG--HSGMGAYGS------------PN- 348
...||| |||||...|..:....| |.|...:|| ||
RBAM_024890__ 322 DGKYKD-DDCGCHDSHHHHHHHHGSHHHGSHHHGSHHHHANMPVQPYPNM 370
BSNT_04044___ 349 -------MPYGTANPNPNPYSAGVSMPMTNQPSVNQMFGRPEEENE 387
||||.||||..| ||||.||:|||||||.:
RBAM_024890__ 371 GASAGYFMPYGGANPNAAP----------NQPSPNQVFGRPEEEED 406
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