Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04041 and RBAM_024880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_04041.1.9828.seq
# -bsequence pep-align/RBAM_024880___coxA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04041-RBAM_024880___coxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04041-RBAM_024880___coxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04041
# 2: RBAM_024880___coxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 97/203 (47.8%)
# Similarity: 122/203 (60.1%)
# Gaps: 37/203 (18.2%)
# Score: 460.5
#
#
#=======================================
BSNT_04041 1 MGKKMTIASLILMTAGLTACGANDNAMNDTRNNDNTRPIGYYSNENDADR 50
|||.|.|.:|||:|||||:|...|
RBAM_024880__ 1 --------------------------MNDGRYNQSTRPVGYYSNDNGNGR 24
BSNT_04041 51 QGDGIDHDGPVSELMEDQNDGNRNTTNVNNRDRVTADDRVPLATDGTYNN 100
...|:||.|||||:||::| |..|||||: |:...:|.|||.|||||
RBAM_024880__ 25 GQYGMDHQGPVSEMMENRN-GRHNTTNVS--DQYAPNDGVPLTTDGTY-- 69
BSNT_04041 101 TNNRNMNRNAA---NNGYDNQENRRLAAKIANRVKQVKNVNDTQVMVSDD 147
|.||:|...| .|||||.||.|||||:|||||:||.|.|:||:|:|.
RBAM_024880__ 70 -NGRNVNTPPAAMSYNGYDNAENIRLAAKVANRVKKVKGVQDSQVIVTDT 118
BSNT_04041 148 RVVIAVKSHREFTKSDRDNVVKAARNYANGRDVQVSTDKGLFRKLHKMNN 197
||||||:::..|||:|..:|..||:.:|:||.:||.||...|.||..||.
RBAM_024880__ 119 RVVIAVRTNHPFTKNDDKHVKHAAKKFADGRTIQVFTDNATFTKLQDMNR 168
BSNT_04041 198 R-- 198
.
RBAM_024880__ 169 NSR 171
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