Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04022 and RBAM_024840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_04022___ruvB.1.9828.seq
# -bsequence pep-align/RBAM_024840___ruvB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04022___ruvB-RBAM_024840___ruvB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04022___ruvB-RBAM_024840___ruvB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04022___ruvB
# 2: RBAM_024840___ruvB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 308/334 (92.2%)
# Similarity: 324/334 (97.0%)
# Gaps: 0/334 ( 0.0%)
# Score: 1573.0
#
#
#=======================================
BSNT_04022___ 1 MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQ 50
|||||||||||:|||:||||||||||||||||.|||||||||||||||||
RBAM_024840__ 1 MDERLVSSEADSHESIIEQSLRPQNLAQYIGQKKVKENLRVFIDAAKMRQ 50
BSNT_04022___ 51 ETLDHVLLYGPPGLGKTTLASIVANEMGVELRTTSGPAIERPGDLAAILT 100
||||||||||||||||||||||||||||||:|||||||||||||||||||
RBAM_024840__ 51 ETLDHVLLYGPPGLGKTTLASIVANEMGVEMRTTSGPAIERPGDLAAILT 100
BSNT_04022___ 101 ALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDL 150
||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_024840__ 101 ALEPGDVLFIDEIHRLNRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDL 150
BSNT_04022___ 151 PPFTLVGATTRVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEV 200
|||||||||||||||||||||||||:|||||||||||.|||:||||||||
RBAM_024840__ 151 PPFTLVGATTRVGLLTAPLRDRFGVLSRLEYYTQEELTDIVSRTADVFEV 200
BSNT_04022___ 201 EIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRITEDISQNALE 250
:|:|..||||||||||||||||||||||||||||||||||||:|:.:|||
RBAM_024840__ 201 DIEKAPALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRITEEIAHDALE 250
BSNT_04022___ 251 RLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYE 300
|||||.||||||||||||||||||:||||||||||||||||.||||||||
RBAM_024840__ 251 RLQVDALGLDHIDHKLLMGMIEKFSGGPVGLDTISATIGEEPHTIEDVYE 300
BSNT_04022___ 301 PYLLQIGFIQRTPRGRIVTPAVYHHFQMEAPRYD 334
||||||||:|||||||:||||||.||::|||..|
RBAM_024840__ 301 PYLLQIGFLQRTPRGRVVTPAVYEHFRLEAPARD 334
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