Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04022 and RBAM_024840

See Amino acid alignment / Visit BSNT_04022 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence dna-align/BSNT_04022___ruvB.1.9828.seq
#    -bsequence dna-align/RBAM_024840___ruvB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04022___ruvB-RBAM_024840___ruvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04022___ruvB-RBAM_024840___ruvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04022___ruvB
# 2: RBAM_024840___ruvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1009
# Identity:     803/1009 (79.6%)
# Similarity:   803/1009 (79.6%)
# Gaps:           8/1009 ( 0.8%)
# Score: 3181.0
# 
#
#=======================================

BSNT_04022___      1 ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGAT     50
                     |||||||||||||||||.||||||||||||||||.||||||||||.|.||
RBAM_024840__      1 ATGGATGAACGGCTCGTTTCAAGTGAAGCAGACAGCCATGAATCAATAAT     50

BSNT_04022___     51 AGAGCAAAGCCTGAGGCCGCAAAATCTGGCACAGTATATCGGGCAGCATA    100
                     .|||||||||||.||||||||.|||||.||.|||||||||||.||..|.|
RBAM_024840__     51 CGAGCAAAGCCTCAGGCCGCAGAATCTCGCCCAGTATATCGGCCAAAAGA    100

BSNT_04022___    101 AGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAG    150
                     ||||.|||||||||.|||||||||||||.|||||||||||||||||.|||
RBAM_024840__    101 AGGTGAAAGAAAATCTGCGCGTGTTTATCGATGCGGCGAAAATGAGGCAG    150

BSNT_04022___    151 GAGACGCTGGATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAAC    200
                     ||.||||||||.||.||||||.|.||||||||.||.||.|||||.|||||
RBAM_024840__    151 GAAACGCTGGACCACGTTCTTTTATACGGGCCTCCGGGTCTCGGGAAAAC    200

BSNT_04022___    201 AACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAATTGCGGACGA    250
                     |||||||||.||.||.||.||.|||||.|||||.|||||..|||||||||
RBAM_024840__    201 AACGCTTGCGTCTATCGTGGCCAATGAGATGGGTGTGGAGATGCGGACGA    250

BSNT_04022___    251 CATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACG    300
                     |||||||.||.||.||.|||||.||.||.||||||||.||.||.||.|||
RBAM_024840__    251 CATCAGGTCCCGCCATCGAAAGACCGGGAGATTTGGCAGCCATTTTGACG    300

BSNT_04022___    301 GCGCTGGAACCGGGAGATGTATTATTTATTGATGAAATACATAGGCTGCA    350
                     |||||.|||||.||.|||||..|.|||||.||.|||||.||.||||||.|
RBAM_024840__    301 GCGCTCGAACCAGGGGATGTGCTGTTTATAGACGAAATTCACAGGCTGAA    350

BSNT_04022___    351 CAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG    400
                     |.|.||.||.||.||.|||||.||.||.||.|||||.||.||.|||||.|
RBAM_024840__    351 CCGCTCAATTGAGGAAGTGCTGTACCCGGCGATGGAGGATTTCTGCCTTG    400

BSNT_04022___    401 ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTT    450
                     |.||.||.|||||.||||||||.||.||||||||.||.||.|||||||||
RBAM_024840__    401 ATATCGTCATTGGAAAAGGCCCGTCCGCCCGCTCCGTCCGTCTCGACCTT    450

BSNT_04022___    451 CCGCCTTTTACGCTGGTGGGAGCCACGACGAGGGTGGGGCTTTTGACGGC    500
                     ||.|||||||||||.||.|||||.|||||.|||||.||..|.|||||.||
RBAM_024840__    451 CCCCCTTTTACGCTTGTAGGAGCAACGACAAGGGTCGGATTATTGACCGC    500

BSNT_04022___    501 TCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACAC    550
                     .||..|.||||||.|.|||||.||..||||.||||||||.||||||||.|
RBAM_024840__    501 ACCGCTCAGAGACCGGTTCGGGGTGCTGTCGCGCCTTGAATACTATACGC    550

BSNT_04022___    551 AAGAAGAACTGGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTT    600
                     |.|||||.|||.|.|||||.||..|||||||.|||||.||.||.||.||.
RBAM_024840__    551 AGGAAGAGCTGACAGATATCGTGTCAAGAACGGCTGACGTTTTTGAAGTG    600

BSNT_04022___    601 GAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGATCGAGAGGGAC    650
                     ||.||.||.|||.|..|||||||.|||||.||.|||.|.||.||.||.||
RBAM_024840__    601 GATATCGAAAAAGCACCGGCTCTGGAAATCGCCAGACGGTCAAGGGGAAC    650

BSNT_04022___    651 GCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAG    700
                     |||.||.||.||.|||||.||.||.|||||||||.|.|||||.|||||.|
RBAM_024840__    651 GCCGCGGGTTGCAAACCGGCTTCTCAGAAGGGTGAGAGATTTTGCCCAGG    700

BSNT_04022___    701 TGCTGGGTGACAGCAGGATTACGGAAGACATTTCTCAGAATGCGCTGGAG    750
                     ||||.||.||||||.|.||.||||||||.||..||||..|.|||||.||.
RBAM_024840__    701 TGCTCGGCGACAGCCGCATCACGGAAGAAATCGCTCACGACGCGCTCGAA    750

BSNT_04022___    751 CGGCTTCAGGTTGA-CCGTCTCGGTTTGGATCATATTGATCATAAGCTGC    799
                     ||.|||||.||.|| .|| |||||..|.||.|||||.||.||||||||||
RBAM_024840__    751 CGTCTTCAAGTCGATGCG-CTCGGCCTTGACCATATCGACCATAAGCTGC    799

BSNT_04022___    800 TGATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACG    849
                     ||||||||||||||||||||||||.||||||.||.||.||||||||||||
RBAM_024840__    800 TGATGGGCATGATCGAAAAATTCAGCGGCGGTCCCGTCGGCCTTGATACG    849

BSNT_04022___    850 ATTTCAGCTACCATCGGCGAGGAATCGCATACGATTGAAGACGTATATGA    899
                     |||||.||.||.||||||||.|||.|||||||.||.||.||.||.||.||
RBAM_024840__    850 ATTTCCGCGACAATCGGCGAAGAACCGCATACAATAGAGGATGTGTACGA    899

BSNT_04022___    900 ACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGA    949
                     |||.|||||||||||.||.||||||.|.||.||.||||||.|.|||.||.
RBAM_024840__    900 ACCGTATCTGCTGCAGATCGGATTTCTTCAGAGGACGCCGAGGGGACGGG    949

BSNT_04022___    950 TCGTGACACCGGCCGTTTATCATCATTTCCAAATGGAGGCTC---CCCGA    996
                     |||||||.|||||.||.|||.|.|||||.|.|.|||||||.|   |||| 
RBAM_024840__    950 TCGTGACTCCGGCTGTGTATGAACATTTTCGATTGGAGGCGCCCGCCCG-    998

BSNT_04022___    997 TATGACTGA   1005
                       |||||||
RBAM_024840__    999 --TGACTGA   1005


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