Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04018 and RBAM_024810

See DNA alignment / Visit BSNT_04018 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_04018___yajC.1.9828.seq
#    -bsequence pep-align/RBAM_024810___yajC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04018___yajC-RBAM_024810___yajC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04018___yajC-RBAM_024810___yajC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04018___yajC
# 2: RBAM_024810___yajC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      81/89 (91.0%)
# Similarity:    83/89 (93.3%)
# Gaps:           3/89 ( 3.4%)
# Score: 400.0
# 
#
#=======================================

BSNT_04018___      1 MMTGTLGTLVPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDSVVTI     50
                       .|||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_024810__      1 --MGTLGTIVPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDSVVTI     48

BSNT_04018___     51 GGLHGTVDSIDESKVVIKTGDNTRLTFDRRAIREVSAAE     89
                     |||||||:||||||||||||||||||||||||||.||. 
RBAM_024810__     49 GGLHGTVESIDESKVVIKTGDNTRLTFDRRAIREASAE-     86


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