Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04018 and RBAM_024810

See Amino acid alignment / Visit BSNT_04018 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence dna-align/BSNT_04018___yajC.1.9828.seq
#    -bsequence dna-align/RBAM_024810___yajC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04018___yajC-RBAM_024810___yajC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04018___yajC-RBAM_024810___yajC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04018___yajC
# 2: RBAM_024810___yajC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     223/270 (82.6%)
# Similarity:   223/270 (82.6%)
# Gaps:           9/270 ( 3.3%)
# Score: 941.0
# 
#
#=======================================

BSNT_04018___      1 ATGATGACTGGCACTTTAGGTACATTGGTTCCTATTATTTTAATGTTTGC     50
                        .||   ||.||||||||.|||.|.|||||||||||||||||||||||
RBAM_024810__      1 ---TTG---GGTACTTTAGGCACAATCGTTCCTATTATTTTAATGTTTGC     44

BSNT_04018___     51 GGTCCTTTACTTCTTGCTGATTCGTCCTCAGCAAAAGCAGCAAAAGGCTG    100
                     .||.|||||.|||.||||.||.|||||.||||||||||||||.|||||.|
RBAM_024810__     45 AGTGCTTTATTTCCTGCTCATCCGTCCGCAGCAAAAGCAGCAGAAGGCCG     94

BSNT_04018___    101 TACGCCAAATGCAAGAGGAACTGAAAAAAGGCGATTCAGTAGTGACAATC    150
                     |||||||.|||||.||.||.|||||||||||.||||||||.|||||||||
RBAM_024810__     95 TACGCCAGATGCAGGAAGAGCTGAAAAAAGGGGATTCAGTGGTGACAATC    144

BSNT_04018___    151 GGGGGATTGCACGGTACTGTTGACTCTATCGACGAAAGCAAAGTCGTAAT    200
                     ||.|||||||||||.||||||||.||.||.||.||||||||.|||||.||
RBAM_024810__    145 GGAGGATTGCACGGCACTGTTGAGTCAATTGATGAAAGCAAGGTCGTCAT    194

BSNT_04018___    201 TAAGACTGGTGATAACACACGTCTTACGTTCGACCGCCGCGCGATCAGAG    250
                     |||.||.|||||||||||.|||.|.||.||.|||||||||||.|||||||
RBAM_024810__    195 TAAAACAGGTGATAACACCCGTTTAACATTTGACCGCCGCGCAATCAGAG    244

BSNT_04018___    251 AAGTTTCTGCTGCTGAATAA    270
                     |||   ||.|.|||||||||
RBAM_024810__    245 AAG---CTTCCGCTGAATAA    261


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