Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04009 and RBAM_024750

See DNA alignment / Visit BSNT_04009 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:21
# Commandline: needle
#    -asequence pep-align/BSNT_04009___yrvC.1.9828.seq
#    -bsequence pep-align/RBAM_024750___yrvC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04009___yrvC-RBAM_024750___yrvC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04009___yrvC-RBAM_024750___yrvC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04009___yrvC
# 2: RBAM_024750___yrvC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     119/165 (72.1%)
# Similarity:   146/165 (88.5%)
# Gaps:           0/165 ( 0.0%)
# Score: 628.0
# 
#
#=======================================

BSNT_04009___      1 MRVRESELPGIGQKVEMITRNRDKISIIIHHDGRRELYYFDENDHEECVA     50
                     |.||||||||||||||:||:|.||||||:|.|||:||||||||||:||:|
RBAM_024750__      1 MNVRESELPGIGQKVEVITKNHDKISIILHDDGRKELYYFDENDHDECLA     50

BSNT_04009___     51 SVQFDDAEARQMSAILGGMAYKPKALEPVESALDDLIIEWCKAEAGAPAI    100
                     ||:|:|.||||:|||||||.|||||||.||.|||||:|||.|||:.|||:
RBAM_024750__     51 SVEFNDEEARQISAILGGMTYKPKALESVEVALDDLVIEWFKAESHAPAV    100

BSNT_04009___    101 HQTIGDLNVGQEYHVTVIAIVKKNQDKQLNPSSETVIDEGDTLVISGEGT    150
                     .:|||||.:.:.|:|.:|||||||:.|||:|..:|||:||||||||||.:
RBAM_024750__    101 SRTIGDLEIKKHYNVQIIAIVKKNRQKQLSPGIDTVIEEGDTLVISGERS    150

BSNT_04009___    151 GLKRLIREKLTAKGA    165
                     |||:|:||:|||:.:
RBAM_024750__    151 GLKKLVREQLTARIS    165


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