Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04007 and RBAM_024730
See
DNA alignment /
Visit
BSNT_04007 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence pep-align/BSNT_04007___yrvE.1.9828.seq
# -bsequence pep-align/RBAM_024730___yrvE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04007___yrvE-RBAM_024730___yrvE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04007___yrvE-RBAM_024730___yrvE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04007___yrvE
# 2: RBAM_024730___yrvE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity: 389/786 (49.5%)
# Similarity: 429/786 (54.6%)
# Gaps: 325/786 (41.3%)
# Score: 2012.0
#
#
#=======================================
BSNT_04007___ 1 MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESARLFL 50
|||||||||||:|||:|||||||||.||||||||||||||||||||||||
RBAM_024730__ 1 MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFL 50
BSNT_04007___ 51 HTKDADFYDPFEMKGMKEAADRIKQAISQQEKIMIYGDYDADGVTSTSVM 100
||||||||||:|:|||:||.||||.|:||.|.||||||||||||||||||
RBAM_024730__ 51 HTKDADFYDPYELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVM 100
BSNT_04007___ 101 LHTLQKLSAQVDFYIPDRFKEGYGPNEQAFRSIKDRGFSLIITVDTGIAA 150
|..|::|||.|||||||||.||||||||||||||:|||||||||||||||
RBAM_024730__ 101 LTALRQLSADVDFYIPDRFTEGYGPNEQAFRSIKERGFSLIITVDTGIAA 150
BSNT_04007___ 151 VHEAKVAKELGLDVIITDHHEPGPELPDVHAIVHPKQPGCTYPFKELAGV 200
|.||:||||||||||||||||||||||||.||:|||||||.|||||||||
RBAM_024730__ 151 VQEAEVAKELGLDVIITDHHEPGPELPDVFAIIHPKQPGCGYPFKELAGV 200
BSNT_04007___ 201 GVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLIATLGLERLRR 250
||||||||||.|.||:.:||||||||:||||||||||||||:||:||||.
RBAM_024730__ 201 GVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLIASLGIERLRT 250
BSNT_04007___ 251 TNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLM 300
|||.|||.||||||||||:|:|||:|||:|||||||||||||||||||||
RBAM_024730__ 251 TNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM 300
BSNT_04007___ 301 SEDSFEAEELAAEIDQLNKERQKMVSKMTDEAIEMVEQQGLDQTAIVVAK 350
:||.|||||||::||:|||||||||..||:||:|||:|||.:.:||||||
RBAM_024730__ 301 TEDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAK 350
BSNT_04007___ 351 AGWNPGVVGIVASKLVDRFYRPAIVLGIDEEKGIAKGSARSIRGFNLFES 400
|||||||||||||||.:||||||:|||||||:||||||||||||||||.|
RBAM_024730__ 351 AGWNPGVVGIVASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTS 400
BSNT_04007___ 401 LSECRDILPHFGGHPMAAGMTLKAEDVPDLRSRLNEIADNTLTEEDFIPV 450
||:||||||||||||||||||||||||.:||.|||::|:.||||||||||
RBAM_024730__ 401 LSQCRDILPHFGGHPMAAGMTLKAEDVAELRDRLNQMAEETLTEEDFIPV 450
BSNT_04007___ 451 QEVDLVCSIEDITVESIAEMNMLSPFGMLNPKPHVLVENAVLEDVRKIGA 500
|||.|..:::.
RBAM_024730__ 451 QEVILSAALKT--------------------------------------- 461
BSNT_04007___ 501 NKTHVKMTIRNESSQLDCVGFNKGELQEGIVPGSRISIVGEMSINEWNNR 550
RBAM_024730__ 461 -------------------------------------------------- 461
BSNT_04007___ 551 KKPQLMIKDAAVSEWQLFDLRGKRTWEDTVSALPSAKRAIVSFKEDSTTL 600
RBAM_024730__ 461 -------------------------------------------------- 461
BSNT_04007___ 601 LQTEDLRREVHVISSKDQAKAFDLDGAYIVLLDPPPSLDMLARLLEGKAP 650
RBAM_024730__ 461 -------------------------------------------------- 461
BSNT_04007___ 651 ERIYFIFLNHEDHFLSTFPARDHFKWYYAFLLKRGAFDVKKHGSELAKHK 700
RBAM_024730__ 461 -------------------------------------------------- 461
BSNT_04007___ 701 GWSVETINFMTKVFFDLGFVKIENGVLSVVSGAKKRDLTDSQTYQAKQQL 750
RBAM_024730__ 461 -------------------------------------------------- 461
BSNT_04007___ 751 MELDQKLNYSSAEELKEWLNKLMKQDSEAYESTRRT 786
RBAM_024730__ 461 ------------------------------------ 461
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.