Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04006 and RBAM_024720

See DNA alignment / Visit BSNT_04006 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:20
# Commandline: needle
#    -asequence pep-align/BSNT_04006___apt.1.9828.seq
#    -bsequence pep-align/RBAM_024720___apt.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04006___apt-RBAM_024720___apt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04006___apt-RBAM_024720___apt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04006___apt
# 2: RBAM_024720___apt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     165/170 (97.1%)
# Similarity:   169/170 (99.4%)
# Gaps:           0/170 ( 0.0%)
# Score: 846.0
# 
#
#=======================================

BSNT_04006___      1 MDLKQYVTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVEYAKEKQID     50
                     ||||:||||||||||||||||||||||||||||||||||||||||||:||
RBAM_024720__      1 MDLKKYVTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVEYAKEKEID     50

BSNT_04006___     51 LVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024720__     51 LVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDV    100

BSNT_04006___    101 LTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIEL    150
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_024720__    101 LTIHKDAILPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIEL    150

BSNT_04006___    151 SYLDGRNKLEDYDILTLMKY    170
                     ||||||:||:||||||||||
RBAM_024720__    151 SYLDGRDKLDDYDILTLMKY    170


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