Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04006 and RBAM_024720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_04006___apt.1.9828.seq
# -bsequence dna-align/RBAM_024720___apt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04006___apt-RBAM_024720___apt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04006___apt-RBAM_024720___apt.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04006___apt
# 2: RBAM_024720___apt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity: 440/514 (85.6%)
# Similarity: 440/514 (85.6%)
# Gaps: 2/514 ( 0.4%)
# Score: 1892.0
#
#
#=======================================
BSNT_04006___ 1 ATGGAT-TTAAAACAATACGTAACAATTGTACCGGATTACCCGAAAGAGG 49
|||||| |||||| ||||||||||||||||.||.||||||||||||||.|
RBAM_024720__ 1 ATGGATCTTAAAA-AATACGTAACAATTGTGCCCGATTACCCGAAAGAAG 49
BSNT_04006___ 50 GCGTGCAATTTAAAGATATTACGACACTGATGGATAAAGGCGATGTATAC 99
||||.|||||||||||||||||||||.|||||||.||||||||.||||||
RBAM_024720__ 50 GCGTACAATTTAAAGATATTACGACATTGATGGACAAAGGCGACGTATAC 99
BSNT_04006___ 100 CGCTATGCCACAGATCAAATTGTTGAATATGCGAAAGAAAAGCAAATTGA 149
||.||.|||||.||.|||||||||||||||||.||||||||..|||||||
RBAM_024720__ 100 CGTTACGCCACTGACCAAATTGTTGAATATGCAAAAGAAAAAGAAATTGA 149
BSNT_04006___ 150 TTTGGTCGTTGGCCCTGAAGCGCGCGGCTTTATTATCGGCTGTCCCGTTG 199
|||.||.||.||.||||||||||||||||||||||||||||||||.||||
RBAM_024720__ 150 TTTAGTTGTCGGGCCTGAAGCGCGCGGCTTTATTATCGGCTGTCCGGTTG 199
BSNT_04006___ 200 CTTACGCGCTTGGCGTAGGTTTTGCGCCGGTCCGCAAAGAAGGCAAGTTG 249
|.|||||.||.||.||.||.|||||||||||.||.||||||||.||..|.
RBAM_024720__ 200 CATACGCTCTCGGAGTGGGCTTTGCGCCGGTTCGGAAAGAAGGAAAACTT 249
BSNT_04006___ 250 CCTCGTGAAGTAATCAAAGTGGATTATGGCTTGGAATACGGAAAAGACGT 299
||.|||||.||.||.|||||.|||||.||.|||||.||||||||||||||
RBAM_024720__ 250 CCGCGTGAGGTCATTAAAGTCGATTACGGTTTGGAGTACGGAAAAGACGT 299
BSNT_04006___ 300 ATTAACGATCCACAAAGATGCGATTAAGCCTGGTCAGCGTGTGCTTATTA 349
|.|.|||||.||.||||||||||||..|||.||.|||||.|||||.||||
RBAM_024720__ 300 ACTGACGATTCATAAAGATGCGATTCTGCCGGGACAGCGCGTGCTGATTA 349
BSNT_04006___ 350 CGGATGACCTGCTTGCGACAGGCGGCACAATTGAAGCGACAATCAAACTT 399
|.||||||.|||||||.|||||||||||.||.|||||.|||||.||.||.
RBAM_024720__ 350 CTGATGACTTGCTTGCAACAGGCGGCACGATCGAAGCAACAATTAAGCTG 399
BSNT_04006___ 400 GTTGAAGAACTTGGCGGCGTTGTTGCTGGTATCGCTTTCTTAATCGAGCT 449
||.||||||||.|||||||||||.||.|||||.||.||||||||||||||
RBAM_024720__ 400 GTCGAAGAACTGGGCGGCGTTGTAGCCGGTATTGCGTTCTTAATCGAGCT 449
BSNT_04006___ 450 TTCTTACCTTGACGGCAGAAATAAGCTCGAAGATTACGACATCTTAACAT 499
|||||||||||||||||||.|.|||||.||.||||||||.||.|||||||
RBAM_024720__ 450 TTCTTACCTTGACGGCAGAGACAAGCTTGACGATTACGATATTTTAACAT 499
BSNT_04006___ 500 TGATGAAATACTAA 513
|.||||||||.|||
RBAM_024720__ 500 TAATGAAATATTAA 513
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