Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03983 and RBAM_024540

See DNA alignment / Visit BSNT_03983 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:17
# Commandline: needle
#    -asequence pep-align/BSNT_03983___glnH.1.9828.seq
#    -bsequence pep-align/RBAM_024540___glnH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03983___glnH-RBAM_024540___glnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03983___glnH-RBAM_024540___glnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03983___glnH
# 2: RBAM_024540___glnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     232/276 (84.1%)
# Similarity:   251/276 (90.9%)
# Gaps:           4/276 ( 1.4%)
# Score: 1162.0
# 
#
#=======================================

BSNT_03983___      1 ---MKKIFSLALISLFAVILLAACSSKGSNGEASKESKKDTLAAIKDNDK     47
                        :.|..||.||||.||.:||||..|.::|: ||.:.|||||:|||.||
RBAM_024540__      1 MSRVTKWLSLGLISLLAVFMLAACGGKETSGD-SKGTGKDTLASIKDRDK     49

BSNT_03983___     48 IVFGVKTDTRLFGLKNPSSGEIEGFDIDIAKQIAKDILVDEKKAEFKEVT     97
                     |:||||||||||||||||||:||||||||:||:|||||.|||||||||||
RBAM_024540__     50 IIFGVKTDTRLFGLKNPSSGDIEGFDIDISKQLAKDILGDEKKAEFKEVT     99

BSNT_03983___     98 SKTRIPMLQNGDIDAIVATMTITDERKKEVDFSDVYFEAGQSLLVKKGSK    147
                     ||||||||||||||||.||||||||||||||||||||||||||||||||.
RBAM_024540__    100 SKTRIPMLQNGDIDAITATMTITDERKKEVDFSDVYFEAGQSLLVKKGSS    149

BSNT_03983___    148 IKSVEDLDKGSKVLAVKGSTSSQNIREKAPEASVLEFENYAEAFTALKSG    197
                     |||.|||.||||||||||||||||||||||:|||||||||||||||||:|
RBAM_024540__    150 IKSTEDLGKGSKVLAVKGSTSSQNIREKAPDASVLEFENYAEAFTALKAG    199

BSNT_03983___    198 QGDALTTDNAILYGMADENKNYQLTGKPFTDEPYGIAVKKGQSALAKEIN    247
                     ||||||||||||||||||||.|||||:.|||||||||||||||.|.||||
RBAM_024540__    200 QGDALTTDNAILYGMADENKQYQLTGETFTDEPYGIAVKKGQSGLIKEIN    249

BSNT_03983___    248 ASLKKMKSDGRYDEIYKKWIKEDPAE    273
                     |||||||:||||::||||||||:||:
RBAM_024540__    250 ASLKKMKADGRYEKIYKKWIKEEPAK    275


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