Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03983 and RBAM_024540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_03983___glnH.1.9828.seq
# -bsequence dna-align/RBAM_024540___glnH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03983___glnH-RBAM_024540___glnH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03983___glnH-RBAM_024540___glnH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03983___glnH
# 2: RBAM_024540___glnH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 842
# Identity: 637/842 (75.7%)
# Similarity: 637/842 (75.7%)
# Gaps: 34/842 ( 4.0%)
# Score: 2398.5
#
#
#=======================================
BSNT_03983___ 1 ATG--------AAAAAGAT-TTTTTCTTTAGCATTGATTTCTTTATTCGC 41
||| ||.||.|| .||.||.||.|.||||||.||..|..|.||
RBAM_024540__ 1 ATGTCACGCGTAACAAAATGGTTGTCATTGGGATTGATATCACTGCTGGC 50
BSNT_03983___ 42 TGTCATCTTGCTTGCCGCTTGCAGCAGCAAGGGATCAAA-----CGGAGA 86
.|||.|..||||.|||||.|||.| |||||...|| ||||||
RBAM_024540__ 51 CGTCTTTATGCTGGCCGCCTGCGG-----AGGGAAAGAAACGTCCGGAGA 95
BSNT_03983___ 87 AGCCTCAAAGGAGAGCAA----AAAAGATACGCTAGCCGCCATTAAAGAC 132
.||||| ||.|| ||||||.|||.|||||.|.|||||||||
RBAM_024540__ 96 ---TTCAAA----AGGAACGGGAAAAGACACGTTAGCCTCTATTAAAGAC 138
BSNT_03983___ 133 AATGACAAAATTGTCTTCGGCGTAAAAACGGACACTCGACTGTTCGGTCT 182
|..||||||||..||||||||||.|||||.|||||..|..|.|||||.||
RBAM_024540__ 139 AGAGACAAAATCATCTTCGGCGTCAAAACCGACACGAGGTTATTCGGGCT 188
BSNT_03983___ 183 TAAAAATCCAAGCTCAGGTGAGATTGAGGGTTTTGATATTGATATTGCCA 232
.|||||.||||||||.|||||.|||||.||.||.|||||||||||..|.|
RBAM_024540__ 189 GAAAAACCCAAGCTCCGGTGATATTGAAGGCTTCGATATTGATATCTCAA 238
BSNT_03983___ 233 AACAAATCGCTAAAGACATTTTAGTTGATGAGAAAAAAGCTGAATTTAAA 282
||||..||||.|||||.|||.|.|..||||||||.|||||.|||||||||
RBAM_024540__ 239 AACAGCTCGCAAAAGATATTCTGGGGGATGAGAAGAAAGCGGAATTTAAA 288
BSNT_03983___ 283 GAGGTCACCTCAAAAACAAGGATTCCTATGCTGCAAAACGGGGATATCGA 332
||.||.||.||||||||.||.|||||.||||||||||||||.||||||||
RBAM_024540__ 289 GAAGTGACGTCAAAAACGAGAATTCCGATGCTGCAAAACGGCGATATCGA 338
BSNT_03983___ 333 CGCCATTGTCGCCACAATGACGATCACTGATGAACGAAAAAAGGAAGTTG 382
.|||||...||||||.|||||.||.||.|||||.||.|||||.|||||||
RBAM_024540__ 339 TGCCATCACCGCCACGATGACAATAACGGATGAGCGGAAAAAAGAAGTTG 388
BSNT_03983___ 383 ACTTTTCTGATGTCTATTTCGAGGCCGGGCAATCGCTTCTCGTGAAAAAA 432
|.||.||.|||||.|||||.||.|||||||||||.||.|||||.||||||
RBAM_024540__ 389 ATTTCTCAGATGTTTATTTTGAAGCCGGGCAATCCCTGCTCGTCAAAAAA 438
BSNT_03983___ 433 GGCAGCAAAATCAAGAGTGTCGAGGATCTTGACAAAGGCTCAAAAGTTCT 482
||.||||..|||||.||...|||.||.||.|..||||||||||||||..|
RBAM_024540__ 439 GGAAGCAGCATCAAAAGCACCGAAGACCTGGGAAAAGGCTCAAAAGTATT 488
BSNT_03983___ 483 TGCAGTAAAAGGCTCCACCTCCTCTCAAAACATTCGTGAAAAGGCGCCTG 532
.||.|||||||||||.||.|||||.||||||||..|.|||||.|||||||
RBAM_024540__ 489 GGCGGTAAAAGGCTCTACTTCCTCACAAAACATCAGAGAAAAAGCGCCTG 538
BSNT_03983___ 533 AAGCATCTGTTTTAGAATTTGAAAACTACGCAGAAGCCTTTACAGCCCTT 582
|.||.||.||..|.|||||||||||.|||||.|||||.||.||.||.|||
RBAM_024540__ 539 ACGCCTCAGTGCTGGAATTTGAAAATTACGCCGAAGCGTTCACTGCGCTT 588
BSNT_03983___ 583 AAATCGGGGCAAGGCGATGCCCTCACCACAGATAATGCGATTTTATATGG 632
|||.||||.||.||.|||||.|||||.||.|||||||||||||||||.||
RBAM_024540__ 589 AAAGCGGGACAGGGAGATGCGCTCACAACCGATAATGCGATTTTATACGG 638
BSNT_03983___ 633 AATGGCTGATGAAAATAAAAATTATCAATTAACAG--GAAAGCCTTTTAC 680
.|||||.||||||||||||.|.|||||..|.|||| |||| |.||.||
RBAM_024540__ 639 CATGGCAGATGAAAATAAACAATATCAGCTGACAGGCGAAA--CCTTCAC 686
BSNT_03983___ 681 AGATGAGCCTTACGGGATCGCCGTGAAAAAAGGGCAATCTGCTCTCGCGA 730
.|||||.||||||||.||||||||.||||||||.|||||.|..|||...|
RBAM_024540__ 687 CGATGAACCTTACGGAATCGCCGTCAAAAAAGGCCAATCCGGACTCATCA 736
BSNT_03983___ 731 AAGAAATCAACGCTTCACTTAAAAAGATGAAGTCGGATGGCAGATACGAT 780
|.|||||||||||.||..|.|||||.|||||..|.||.|||||.|||||.
RBAM_024540__ 737 AGGAAATCAACGCCTCTTTGAAAAAAATGAAAGCCGACGGCAGGTACGAA 786
BSNT_03983___ 781 GAAATTTATAAAAAATGGATCAAAGAAGACCCAGCTGAATAA 822
.||||.||||||||||||||.||||||||.||.||..||||.
RBAM_024540__ 787 AAAATCTATAAAAAATGGATTAAAGAAGAACCGGCAAAATAG 828
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