Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03981 and RBAM_024530

See DNA alignment / Visit BSNT_03981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:17
# Commandline: needle
#    -asequence pep-align/BSNT_03981___glnQ.1.9828.seq
#    -bsequence pep-align/RBAM_024530___glnQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03981___glnQ-RBAM_024530___glnQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03981___glnQ-RBAM_024530___glnQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03981___glnQ
# 2: RBAM_024530___glnQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     209/242 (86.4%)
# Similarity:   227/242 (93.8%)
# Gaps:           0/242 ( 0.0%)
# Score: 1082.0
# 
#
#=======================================

BSNT_03981___      1 MITFQNVNKHYGDFHVLKQINLQIEKGEVVVIIGPSGSGKSTLLRCINRL     50
                     ||:||:||||||.|||||.|||.|:|||||||||||||||||||||||:|
RBAM_024530__      1 MISFQDVNKHYGHFHVLKNINLHIKKGEVVVIIGPSGSGKSTLLRCINQL     50

BSNT_03981___     51 ETINEGVLTVNGTAINDRKTDINKVRQNIGMVFQHFHLYPHKTVLQNIML    100
                     ||::.|.|||||.:|:|:.|||||||:|||||||||||||||||||||||
RBAM_024530__     51 ETVDGGALTVNGVSIHDKTTDINKVRRNIGMVFQHFHLYPHKTVLQNIML    100

BSNT_03981___    101 APVKVLRQSPEQAKETARYYLEKVGIPDKADAYPSQLSGGQQQRVAIARG    150
                     ||:|||:||.|:|||||.|||:|||||:||||||||||||||||||||||
RBAM_024530__    101 APIKVLKQSKEEAKETALYYLKKVGIPEKADAYPSQLSGGQQQRVAIARG    150

BSNT_03981___    151 LAMKPEVMLFDEPTSALDPEMIGEVLDVMKTLAKEGMTMVVVTHEMGFAK    200
                     ||||||:||||||||||||||||||||||||||||||||.||||||||||
RBAM_024530__    151 LAMKPEIMLFDEPTSALDPEMIGEVLDVMKTLAKEGMTMAVVTHEMGFAK    200

BSNT_03981___    201 EVADRIVFIDEGKILEEAMPAEFYANPKEERARLFLSRILNH    242
                     ||||||||||.|.|||||.|.|||.:|:||||||||||||||
RBAM_024530__    201 EVADRIVFIDGGAILEEAAPVEFYESPREERARLFLSRILNH    242


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