Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03981 and RBAM_024530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_03981___glnQ.1.9828.seq
# -bsequence dna-align/RBAM_024530___glnQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03981___glnQ-RBAM_024530___glnQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03981___glnQ-RBAM_024530___glnQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03981___glnQ
# 2: RBAM_024530___glnQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 576/742 (77.6%)
# Similarity: 576/742 (77.6%)
# Gaps: 26/742 ( 3.5%)
# Score: 2221.5
#
#
#=======================================
BSNT_03981___ 1 ATGATCACATTTCAAAATGTAAACAAGCATTACGGAGATTTTCACGTGTT 50
|||||..|||||||..|||||||.|||||.||||||.||||.||||||.|
RBAM_024530__ 1 ATGATTTCATTTCAGGATGTAAATAAGCACTACGGACATTTCCACGTGCT 50
BSNT_03981___ 51 AAAACAAATTAATCTTCAAATCGAAAAAGGTGAAGTCGTTGTTATCATCG 100
.|||.|.||||||||.||.||..|||||||.||||||||.||||||||||
RBAM_024530__ 51 GAAAAACATTAATCTGCACATTAAAAAAGGGGAAGTCGTCGTTATCATCG 100
BSNT_03981___ 101 GCCCATCCGGTTCCGGTAAAAGCACATTGCTCAGATGCATCAA-CAGACT 149
|.||.||.||.||.||.||||||||..|.|||.|.|||||.|| ||| ||
RBAM_024530__ 101 GACCTTCAGGATCGGGAAAAAGCACGCTTCTCCGCTGCATTAATCAG-CT 149
BSNT_03981___ 150 TGAGACGATCAATGAGGGAGTGC----TTACAGTAAACGGCACCGCCATT 195
.||.||..| |||.|||| || |.||.|||||||||..|.||||.
RBAM_024530__ 150 GGAAACAGT---TGATGGAG-GCGCCTTAACGGTAAACGGCGTCTCCATC 195
BSNT_03981___ 196 AACGACAGAAAAACTGATATCAATAAAGTGCGGCAAAATATCGGGATGGT 245
.|.||||..|.|||.|||||.|||||.||.||.|..||||||||.|||||
RBAM_024530__ 196 CATGACAAGACAACGGATATAAATAAGGTCCGCCGCAATATCGGCATGGT 245
BSNT_03981___ 246 GTTTCAGCACTTTCATTTATATCCACATAAAACAGTGCTGCAGAACATCA 295
|||.|||||.||||||.|.||.||.||.|||||.||.|||||.|||||||
RBAM_024530__ 246 GTTCCAGCATTTTCATCTGTACCCGCACAAAACCGTTCTGCAAAACATCA 295
BSNT_03981___ 296 TGCTGGCTCCGGTAAAAGTGCTTAGACAATCACCTGAACAAGCAAAGGAA 345
||||.||.|||.|.||||||||||..||||||...|||.|||||||.|||
RBAM_024530__ 296 TGCTCGCACCGATCAAAGTGCTTAAGCAATCAAAAGAAGAAGCAAAAGAA 345
BSNT_03981___ 346 ACGGCGCGGTACTATCTTG-AAAAAGTCGGCATCCCAGACAAGGCTGACG 394
|||||....|||||| ||| ||||||||||.||.||.||.||.||.||||
RBAM_024530__ 346 ACGGCCTTATACTAT-TTGAAAAAAGTCGGTATACCGGAAAAAGCGGACG 394
BSNT_03981___ 395 CCTATCCTTCCCAGCTTTCCGGCGGGCAGCAGCAGCGTGTTGCCATCGCA 444
|.||||||||.||||||||||||||.||||||||||||||.||||||||.
RBAM_024530__ 395 CTTATCCTTCACAGCTTTCCGGCGGCCAGCAGCAGCGTGTCGCCATCGCC 444
BSNT_03981___ 445 AGAGGACTGGCGATGAAGCCGGAGGTCATGCTGTTTGACGAGCCGACATC 494
||.||.||.|||||||||||.||..|.|||||||||||.||.||.|||||
RBAM_024530__ 445 AGGGGGCTTGCGATGAAGCCCGAAATTATGCTGTTTGATGAACCCACATC 494
BSNT_03981___ 495 AGCACTTGATCCTGAAATGATCGGTGAGGTGCTAGATGTCATGAAAACAC 544
.||.||||||||.|||||||||||.||.|||||.||||||||||||||||
RBAM_024530__ 495 CGCGCTTGATCCGGAAATGATCGGGGAAGTGCTGGATGTCATGAAAACAC 544
BSNT_03981___ 545 TCGCCAAAGAAGGCATGACAATGGTTGTCGTGACACACGAAATGGGGTTT 594
||||.||.|||||||||||.||||..|||||.|||||.||||||||.||.
RBAM_024530__ 545 TCGCAAAGGAAGGCATGACCATGGCAGTCGTCACACATGAAATGGGATTC 594
BSNT_03981___ 595 GCCAAAGAAGTTGCCGACCGGATTGTCTTCATTGACGAAGGAAAGATTTT 644
||.||||||||.||.|||||.||.||.||.||.||||..|||...||.||
RBAM_024530__ 595 GCAAAAGAAGTGGCGGACCGCATCGTGTTTATCGACGGCGGAGCCATCTT 644
BSNT_03981___ 645 AGAAGAAGCAATGCCGGCTGAGTTTTACGCGAACCCAAAG-------GAA 687
||||||||||...||||.|||.||||||| |||| |||
RBAM_024530__ 645 AGAAGAAGCAGCACCGGTTGAATTTTACG-------AAAGCCCCCGTGAA 687
BSNT_03981___ 688 GAACGGGCCCGCTTATTCTTAAGCCGTATTTTAAATCATTAA 729
||..||||.||.||||||||||||||||||||||||||.|.|
RBAM_024530__ 688 GAGAGGGCGCGTTTATTCTTAAGCCGTATTTTAAATCACTGA 729
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