Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03973 and RBAM_024470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_03973___yrrL.1.9828.seq
# -bsequence pep-align/RBAM_024470___yrrL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03973___yrrL-RBAM_024470___yrrL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03973___yrrL-RBAM_024470___yrrL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03973___yrrL
# 2: RBAM_024470___yrrL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 275/363 (75.8%)
# Similarity: 316/363 (87.1%)
# Gaps: 3/363 ( 0.8%)
# Score: 1425.0
#
#
#=======================================
BSNT_03973___ 1 MYINQQKKSFFNKKR---IILSSIVVLFLIIGGAFLYGKSLLEPVEKDSK 47
|.|||.|.||..|.: |||||::.|.:||.|||.||||||.||:|.||
RBAM_024470__ 1 MNINQTKHSFPRKNKKTTIILSSVIALLIIICGAFFYGKSLLSPVDKGSK 50
BSNT_03973___ 48 TTVNINIPSGSSVSAIASILKKNDVIKSEKAFQYYVKYKGASGFQAGFYH 97
|.|||||||||||||||.||:...||||:||||.||||||||||||||||
RBAM_024470__ 51 TAVNINIPSGSSVSAIAEILEDQHVIKSKKAFQLYVKYKGASGFQAGFYH 100
BSNT_03973___ 98 LNKGMDLDAIIQKLTSGATGYAFQITVTEGAQLTQIAAAIADETKYSKKQ 147
||||||.||||:|||:|:|||||||:|.||.||||||.|||.||.|||::
RBAM_024470__ 101 LNKGMDADAIIKKLTAGSTGYAFQISVPEGKQLTQIAEAIAKETSYSKEE 150
BSNT_03973___ 148 VIAKLDDETFINQLKKEFPDTVTNDVFNKNIKHPLEGYLFPATYPFNDPD 197
::|||||:|||.:|||:||||:|:.:.||.:||||||||:||||||||||
RBAM_024470__ 151 IMAKLDDKTFIGKLKKQFPDTITDALSNKKLKHPLEGYLYPATYPFNDPD 200
BSNT_03973___ 198 TSLEDIIKAMIKQTNSYVETYKSEMKKNKVSVHKLLTMASLIEEEATEKA 247
.||:.|:.||:::||:.:||||||::|.|:|||..||||||||||||.||
RBAM_024470__ 201 ASLDTILTAMVQETNTRIETYKSELEKKKLSVHNALTMASLIEEEATAKA 250
BSNT_03973___ 248 DRHKIASVFYNRLKKKMPLQTDPTVLYAAGKHKDRVLYKDLEIDSPYNTY 297
|||||||||||||::||||||||||||||||||.||.||||:||||:|||
RBAM_024470__ 251 DRHKIASVFYNRLEEKMPLQTDPTVLYAAGKHKSRVYYKDLKIDSPFNTY 300
BSNT_03973___ 298 KNTGLTPGPIANAGMSSWEAALHPDKTDYLYFLAKSNGEVVFTKTLKEHN 347
|:.||.||||||||.|||||||.||||||||||||||||||||||||:||
RBAM_024470__ 301 KHKGLPPGPIANAGDSSWEAALRPDKTDYLYFLAKSNGEVVFTKTLKDHN 350
BSNT_03973___ 348 KAKEKYISSKNEK 360
||||||||.|:.:
RBAM_024470__ 351 KAKEKYISKKDSE 363
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