Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03971 and RBAM_024460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_03971___yrrM.1.9828.seq
# -bsequence pep-align/RBAM_024460___yrrM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03971___yrrM-RBAM_024460___yrrM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03971___yrrM-RBAM_024460___yrrM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03971___yrrM
# 2: RBAM_024460___yrrM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 168/217 (77.4%)
# Similarity: 197/217 (90.8%)
# Gaps: 0/217 ( 0.0%)
# Score: 900.0
#
#
#=======================================
BSNT_03971___ 1 MTDRYEQINDYIEALLKPRPDNVKKLEAYAEEHHVPIMEKAGMEVLLQIL 50
|.|||||||:||.|:||||||.||||||||:||||||||:||:|||||:|
RBAM_024460__ 1 MNDRYEQINEYINAMLKPRPDKVKKLEAYAKEHHVPIMEEAGIEVLLQML 50
BSNT_03971___ 51 SVKQPKKILEIGTAIGYSAIRMALELPSAEIYTIERNEKRHEEAVNNIKE 100
|::|.|.|||||.||||||||||||||.|.||||||::||:||||||||:
RBAM_024460__ 51 SIQQAKNILEIGAAIGYSAIRMALELPDANIYTIERDDKRYEEAVNNIKD 100
BSNT_03971___ 101 FQLDDRIHVFYGDALELADAVHVTAPYDVIFIDAAKGQYQNFFHLYEPML 150
|::::||.|.:||||||:::|.||||||.||||||||||.|||.||||||
RBAM_024460__ 101 FEMENRIRVMHGDALELSESVRVTAPYDAIFIDAAKGQYTNFFELYEPML 150
BSNT_03971___ 151 SPDGVIITDNVLFKGLVAEDYSKIEPKRRRRLVAKIDEYNHWLMNHPDYQ 200
:|||||.|||||||||||:::|.|||||||:||.|||:||.|||:.||||
RBAM_024460__ 151 APDGVIFTDNVLFKGLVAQNHSDIEPKRRRKLVEKIDQYNQWLMDRPDYQ 200
BSNT_03971___ 201 TAIIPVGDGLAISKKKR 217
|.|:|||||:|||||||
RBAM_024460__ 201 TVILPVGDGIAISKKKR 217
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