Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03966 and RBAM_024420

See DNA alignment / Visit BSNT_03966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:15
# Commandline: needle
#    -asequence pep-align/BSNT_03966___greA.1.9828.seq
#    -bsequence pep-align/RBAM_024420___greA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03966___greA-RBAM_024420___greA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03966___greA-RBAM_024420___greA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03966___greA
# 2: RBAM_024420___greA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     150/157 (95.5%)
# Similarity:   155/157 (98.7%)
# Gaps:           0/157 ( 0.0%)
# Score: 750.0
# 
#
#=======================================

BSNT_03966___      1 MAQEKVFPMTAEGKQKLEQELEYLKTVKRKEVVERIKIARSFGDLSENSE     50
                     ||||||||||.|||||||||||.|||||||||||||||||||||||||||
RBAM_024420__      1 MAQEKVFPMTHEGKQKLEQELEQLKTVKRKEVVERIKIARSFGDLSENSE     50

BSNT_03966___     51 YDSAKEEQAFVEGRVTTLENMIRNAKIIEDDGGSNVVGLGKTVTFVELPD    100
                     ||||||||||||||:||||||||||||||||||||||||||||:|:||||
RBAM_024420__     51 YDSAKEEQAFVEGRITTLENMIRNAKIIEDDGGSNVVGLGKTVSFIELPD    100

BSNT_03966___    101 GDEESYTIVGSAEADPFEGKISNDSPIAKSLLGKKVDEEVTVQTPGGEML    150
                     |:|||||||||||||||||||||||||||||||:||||||||||||||||
RBAM_024420__    101 GEEESYTIVGSAEADPFEGKISNDSPIAKSLLGRKVDEEVTVQTPGGEML    150

BSNT_03966___    151 VKIVKIS    157
                     |||||||
RBAM_024420__    151 VKIVKIS    157


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