Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03958 and RBAM_024360

See DNA alignment / Visit BSNT_03958 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_03958___yrhA.1.9828.seq
#    -bsequence pep-align/RBAM_024360___yrhA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03958___yrhA-RBAM_024360___yrhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03958___yrhA-RBAM_024360___yrhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03958___yrhA
# 2: RBAM_024360___yrhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     255/307 (83.1%)
# Similarity:   283/307 (92.2%)
# Gaps:           2/307 ( 0.7%)
# Score: 1342.0
# 
#
#=======================================

BSNT_03958___      1 MTVITDITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDM     50
                       :|||||||||||||||||:||:|||.||||||||||||||||||||.|
RBAM_024360__      1 --MITDITELIGNTPLLRLKHFDIPEGTAVYAKLEMMNPGGSIKDRLGGM     48

BSNT_03958___     51 LIRDALDSGKVKPGGVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSR    100
                     ||.|||.:|||||||||||||||||||||||.|||:.|:|:|||||||||
RBAM_024360__     49 LIEDALRTGKVKPGGVIIEATAGNTGIGLALCARKHQLRAVFCVPEHFSR     98

BSNT_03958___    101 EKQQIMQALGASIIHTPRQDGMQGAIQKAIQLESEIENSYCVLQFKNRVN    150
                     ||||||:||||.|:||||::||||||:||::||.||.|||.|||||||||
RBAM_024360__     99 EKQQIMKALGADIVHTPREEGMQGAIRKALELEREINNSYAVLQFKNRVN    148

BSNT_03958___    151 PSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLKEKNPAVKTV    200
                     |.|||||:|||:|.||.|:||.|||||||||||||||::|||||||||||
RBAM_024360__    149 PLTYYKTIGPEIWNALGGDIHAFVAGAGSGGTFAGTAAYLKEKNPAVKTV    198

BSNT_03958___    201 IVEPEGSILNGGEPHAHKTEGIGMEFIPDYMNKSHFDKIYTVTDENAFRL    250
                     |||||||||||||||||||||||||||||||:::|||.||||.|:.||.|
RBAM_024360__    199 IVEPEGSILNGGEPHAHKTEGIGMEFIPDYMDENHFDAIYTVEDDTAFSL    248

BSNT_03958___    251 VKEAAEKEGLLIGSSSGAALYAALEEAKKASAGTNIVTVFPDSSDRYISK    300
                     |:||||||||||||||||||||||||||||.||:||||:|||.|||||||
RBAM_024360__    249 VREAAEKEGLLIGSSSGAALYAALEEAKKAPAGSNIVTIFPDGSDRYISK    298

BSNT_03958___    301 QIYEGGI    307
                     .|::||.
RBAM_024360__    299 NIFQGGQ    305


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