Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03956 and RBAM_024340

See DNA alignment / Visit BSNT_03956 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_03956___yrhC.1.9828.seq
#    -bsequence pep-align/RBAM_024340___yrhC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03956___yrhC-RBAM_024340___yrhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03956___yrhC-RBAM_024340___yrhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03956___yrhC
# 2: RBAM_024340___yrhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      60/76 (78.9%)
# Similarity:    66/76 (86.8%)
# Gaps:           0/76 ( 0.0%)
# Score: 314.0
# 
#
#=======================================

BSNT_03956___      1 MHKNRMKSLKEDYKHFAFTLLAVSTFLYIGAVLPDQGLTLGQKSTMFLAD     50
                     |.|.|:|||.||:||:||.|||||||:|||||||.||||.|||..||:.|
RBAM_024340__      1 MEKKRLKSLIEDFKHYAFILLAVSTFIYIGAVLPGQGLTAGQKMLMFVTD     50

BSNT_03956___     51 CVFLAGAFFCADRSLIYKKRLEEADE     76
                     |||||||:||.|||||||||||||||
RBAM_024340__     51 CVFLAGAYFCVDRSLIYKKRLEEADE     76


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