Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03956 and RBAM_024340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence dna-align/BSNT_03956___yrhC.1.9828.seq
# -bsequence dna-align/RBAM_024340___yrhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03956___yrhC-RBAM_024340___yrhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03956___yrhC-RBAM_024340___yrhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03956___yrhC
# 2: RBAM_024340___yrhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 179/233 (76.8%)
# Similarity: 179/233 (76.8%)
# Gaps: 4/233 ( 1.7%)
# Score: 655.0
#
#
#=======================================
BSNT_03956___ 1 TTGCACAAAAATAGAATGAAATCTTTAAAAGAAGACTACAAGCATTTTGC 50
.||.|.||.||.|||.|||||||.||||.||||||.|..|||||||..||
RBAM_024340__ 1 ATGGAGAAGAAAAGACTGAAATCATTAATAGAAGATTTTAAGCATTACGC 50
BSNT_03956___ 51 TTTTACATTGCTTGCAGTCAGCACTTTTTTATATATAGGTGCAGTTC-TC 99
.||||...||||||||||||||||.||..|.|||||.||.||.|||| ||
RBAM_024340__ 51 ATTTATTCTGCTTGCAGTCAGCACCTTCATTTATATCGGCGCGGTTCTTC 100
BSNT_03956___ 100 CCTGATCAAGGCTTAACATTAGGCCAGAAATCGACGATGTTTTTAGCGGA 149
||.|| |||||..|.||....|||||||||..|..|||||||.||.||||
RBAM_024340__ 101 CCGGA-CAAGGGCTGACCGCGGGCCAGAAAATGCTGATGTTTGTAACGGA 149
BSNT_03956___ 150 TTGCGTATTTTTAGCCGGTGCCTTCTTT-TGCGCTGACCGTTCACTTATT 198
|||.|||||||||||.||.| |||.||| ||||.||||||||||||||||
RBAM_024340__ 150 TTGTGTATTTTTAGCGGGCG-CTTATTTCTGCGTTGACCGTTCACTTATT 198
BSNT_03956___ 199 TACAAGAAGCGTCTGGAAGAAGCTGACGAATAA 231
||.||.|||.|.||||||||.||.||.||||||
RBAM_024340__ 199 TATAAAAAGAGGCTGGAAGAGGCCGATGAATAA 231
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