Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03951 and RBAM_024330

See DNA alignment / Visit BSNT_03951 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_03951___yrhD.1.9828.seq
#    -bsequence pep-align/RBAM_024330___yrhD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03951___yrhD-RBAM_024330___yrhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03951___yrhD-RBAM_024330___yrhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03951___yrhD
# 2: RBAM_024330___yrhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     123/163 (75.5%)
# Similarity:   144/163 (88.3%)
# Gaps:           3/163 ( 1.8%)
# Score: 624.0
# 
#
#=======================================

BSNT_03951___      1 MATPITTIKKETKTAEQIKLEKIEELKELLAENEDAVSKTMTLMNELNDL     50
                     ||:|||.|:|||||.||:|.||:||||.||||||:||:|||::|.|||.|
RBAM_024330__      1 MASPITEIQKETKTEEQLKAEKLEELKTLLAENEEAVAKTMSIMAELNGL     50

BSNT_03951___     51 GIFDAATSMLRAKEDIAKIALGQVSREPVTNLINTMMAAGGALTKADPEF    100
                     ||||||..||:|||:||||||||:||||||||:||||||||||:||||||
RBAM_024330__     51 GIFDAAGYMLQAKEEIAKIALGQISREPVTNLLNTMMAAGGALSKADPEF    100

BSNT_03951___    101 TAKLLESVMAGTEQAQSFLKEDKKVGVLDLLKAMNDPDINRAVGFGLQFL    150
                     ..:||||.||||:|||.|||||:||.:.:|:||:.|||||||:|||||||
RBAM_024330__    101 MGRLLESAMAGTDQAQRFLKEDRKVSMFELMKAVGDPDINRALGFGLQFL    150

BSNT_03951___    151 KGMGKELREK---    160
                     |||||||||.   
RBAM_024330__    151 KGMGKELRETPSE    163


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