Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03950 and RBAM_024320

See DNA alignment / Visit BSNT_03950 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence pep-align/BSNT_03950___yrhE.1.9828.seq
#    -bsequence pep-align/RBAM_024320___yrhE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03950___yrhE-RBAM_024320___yrhE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03950___yrhE-RBAM_024320___yrhE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03950___yrhE
# 2: RBAM_024320___yrhE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 995
# Identity:     902/995 (90.7%)
# Similarity:   944/995 (94.9%)
# Gaps:          13/995 ( 1.3%)
# Score: 4877.0
# 
#
#=======================================

BSNT_03950___      1 -------------MNMMDGKSISVRVDGTEIQARAGATILDILNENGIEY     37
                                  :.:.|.:||.|::||||.:|..|:.||||||:||||.
RBAM_024320__      1 MHGFFSSLKDGGELEVTDVQSIRVKIDGTEYEAPEGSKILDILNQNGIEI     50

BSNT_03950___     38 PQICHVPEVDPIQTCDTCIVEANGKLVRSCATVAENGMSIDLSGNRVKEA     87
                     |||||||||||||||||||||.||||.|||:|.|||||||.|:..|||||
RBAM_024320__     51 PQICHVPEVDPIQTCDTCIVEVNGKLQRSCSTAAENGMSISLTSGRVKEA    100

BSNT_03950___     88 QTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEMMGIEHQKYPYTPKEDP    137
                     |||||||||||||||||||||||||||||||||||||||||||||||:|.
RBAM_024320__    101 QTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEMMGIEHQKYPYTPKDDS    150

BSNT_03950___    138 SCAVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWERERPRVIW    187
                     .||||||||||||||||||||||||||||||||||||||||||:||||||
RBAM_024320__    151 KCAVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWERDRPRVIW    200

BSNT_03950___    188 DEGVPINESSCVSCGQCVTVCPCNALMEKSMLGQAGFMTGIKEDVMEPMI    237
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_024320__    201 DEGVAINESSCVSCGQCVTVCPCNALMEKSMLGQAGFMTGIKEDVMEPMI    250

BSNT_03950___    238 DLVKNVEPGYGSIFAISEVEAAMRETRTKKTKTVCTFCGVGCSFEVWTKG    287
                     ||||||||.|.||||:||||||||:.||||||||||||||||||||||||
RBAM_024320__    251 DLVKNVEPDYTSIFAVSEVEAAMRDKRTKKTKTVCTFCGVGCSFEVWTKG    300

BSNT_03950___    288 RDILKIQPVSDAPVNAISTCVKGKFGWDFVNSEERITKPLIRKNGAFVES    337
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024320__    301 RDILKIQPVSDAPVNAISTCVKGKFGWDFVNSEERITKPLIRKNGAFVES    350

BSNT_03950___    338 SWEEALDLVASRLGSIKEQYGKGSVGFISSSKITNEENYVIQKLARQVFE    387
                     |||||||||||||||||.::|.||||||||||||||:|||||||||||||
RBAM_024320__    351 SWEEALDLVASRLGSIKAEHGNGSVGFISSSKITNEDNYVIQKLARQVFE    400

BSNT_03950___    388 TNNVDNCSRYCQSPATDGLFRTVGMGGDAGTIKDIAKAGLVIIVGANPAE    437
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_024320__    401 TNNVDNCSRYCQSPATDGLFRTVGMGGDAGTIKDIAKAGLVLIVGANPAE    450

BSNT_03950___    438 GHPVLATRVKRAHKLHGQKLIVADLRKNEMAERSDLFISPKQGTDQVWLM    487
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_024320__    451 GHPVLATRVKRAHKLHGQKLIVADLRRNEMAERSDLFISPKQGTDQVWLM    500

BSNT_03950___    488 AVTKYMIDQGWHDQAFIDENVNYFEDYKETLKTYTLDYAERITGLSKENI    537
                     ||||||||||||||||||||||||:||||||:.|||||||||||||::.|
RBAM_024320__    501 AVTKYMIDQGWHDQAFIDENVNYFDDYKETLEKYTLDYAERITGLSQDTI    550

BSNT_03950___    538 IQIAEMIRDADGTCVLWGMGVTQNTGGSDTSAAISNLLLATGNYRRPGAG    587
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024320__    551 IRIAEMIRDADGTCVLWGMGVTQNTGGSDTSAAISNLLLATGNYRRPGAG    600

BSNT_03950___    588 AYPLRGHNNVQGACDMGTLPGWLPGYQHITDDKARAKFEEAYGVEIDGKP    637
                     ||||||||||||||||||||||||||||||||.||||||:||||||||||
RBAM_024320__    601 AYPLRGHNNVQGACDMGTLPGWLPGYQHITDDAARAKFEKAYGVEIDGKP    650

BSNT_03950___    638 GLDNIQMLHAIEEGKMKAMYLVGEDMALVDSNANHVHDILSSLDFFVVQD    687
                     |||||:||||||||.|||||||||||||||||||||||||||||||||||
RBAM_024320__    651 GLDNIEMLHAIEEGNMKAMYLVGEDMALVDSNANHVHDILSSLDFFVVQD    700

BSNT_03950___    688 IFLSRTAQYADVVLPATPSLEKDGTFTNTERRVQRLYQALPTLGDAKPDW    737
                     ||||||||||||:|||.|||||||||||||||||||||||||||||||||
RBAM_024320__    701 IFLSRTAQYADVILPAVPSLEKDGTFTNTERRVQRLYQALPTLGDAKPDW    750

BSNT_03950___    738 WIIQEVANRLGANWNYSHPSDIFSEMASLSPLFAKASYEVLEGWNSFLWG    787
                     ||||||||||||:|||:||||||||||||||||.||||:||.||||||||
RBAM_024320__    751 WIIQEVANRLGADWNYTHPSDIFSEMASLSPLFGKASYDVLSGWNSFLWG    800

BSNT_03950___    788 SFTGESTPLLYEDGFNFPDKKARFALSDWTEPAAFPEEYDLHINNGRMLE    837
                     |||||||||||||||||||||||||||||.|||.||||||||||||||||
RBAM_024320__    801 SFTGESTPLLYEDGFNFPDKKARFALSDWVEPAVFPEEYDLHINNGRMLE    850

BSNT_03950___    838 HFHEGNMTNKSKGIQAKVPNVFVEISPELAQERGVCDGSLVRLVSPFGAV    887
                     |||||||||||||||:|||:||||:|||||.|||:|||:::|||||||||
RBAM_024320__    851 HFHEGNMTNKSKGIQSKVPDVFVEVSPELAAERGICDGTMIRLVSPFGAV    900

BSNT_03950___    888 KLNALITDRVRKNELYLPMNSTDKESAINFLTGPAADKRTNTPAYKQTKV    937
                     |||||:|||||.||||||||||||:||||||||||.|.||:|||||||||
RBAM_024320__    901 KLNALVTDRVRANELYLPMNSTDKDSAINFLTGPAYDSRTHTPAYKQTKV    950

BSNT_03950___    938 RMEVLGGCETAPLPKTNPRNKKRHPQNGVEAERKWNRPGYVHLTD    982
                     ||||||.|:|.||||||||||||||||||||:|||||||||||||
RBAM_024320__    951 RMEVLGSCDTPPLPKTNPRNKKRHPQNGVEAQRKWNRPGYVHLTD    995


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03950 and RBAM_024320

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
