Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03938 and RBAM_024270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence pep-align/BSNT_03938___yrhI.1.9828.seq
# -bsequence pep-align/RBAM_024270___yrhI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03938___yrhI-RBAM_024270___yrhI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03938___yrhI-RBAM_024270___yrhI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03938___yrhI
# 2: RBAM_024270___yrhI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 122/204 (59.8%)
# Similarity: 156/204 (76.5%)
# Gaps: 24/204 (11.8%)
# Score: 673.0
#
#
#=======================================
BSNT_03938___ 1 --------------------MIMKASVSLFTERGFDATTIPMIAERAHVG 30
:|||||::|||:||||||||||||.:|.||
RBAM_024270__ 1 MNIHSAFRKGDEMTASNKVELIMKASLTLFTDRGFDATTIPMIAAQADVG 50
BSNT_03938___ 31 TGTIYRYFDSKETLVNVLFQESIQRFTEKLKQDVSELPVREGFHHVFCCL 80
||||||||||||||||||:|||.|||.:|:|.|...:.|||||||:|.||
RBAM_024270__ 51 TGTIYRYFDSKETLVNVLYQESAQRFMKKVKTDFQGISVREGFHHLFYCL 100
BSNT_03938___ 81 VQFTKESDYALFFLETKKDAHYLNHTSKKMIENLTQMLDDYFNKGKAEGV 130
:.|||||:||||||||.|||::||.||:|:::.:|||||.:|.:||:|||
RBAM_024270__ 101 IDFTKESEYALFFLETNKDAYFLNETSRKLLDEITQMLDVFFQRGKSEGV 150
BSNT_03938___ 131 IRSLPSNVLIAIVLGAFLKIYQLVQTGDIEMDTDLITELEQCCWDAIKLH 180
:|:||||||:|::|||:||:||||:||.:|:....:.|||||.||||:.|
RBAM_024270__ 151 LRNLPSNVLMALLLGAYLKLYQLVRTGSVEITKPFLKELEQCSWDAIRTH 200
BSNT_03938___ 181 SSQK 184
RBAM_024270__ 200 ---- 200
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