Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02043 and RBAM_024230

See DNA alignment / Visit BSNT_02043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02043___yjdI.1.9828.seq
#    -bsequence pep-align/RBAM_024230___yjdI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02043___yjdI-RBAM_024230___yjdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02043___yjdI-RBAM_024230___yjdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02043___yjdI
# 2: RBAM_024230___yjdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     120/160 (75.0%)
# Similarity:   139/160 (86.9%)
# Gaps:           1/160 ( 0.6%)
# Score: 615.0
# 
#
#=======================================

BSNT_02043___      1 MAKKMAKTNAVRLIEQQNISYEVLGYKTD-GQPVDGISVAEKIGYPLKYV     49
                     ||||..||||||:||||||.||:|||||: |||.||:||::||||..:||
RBAM_024230__      1 MAKKTVKTNAVRIIEQQNIPYELLGYKTEGGQPADGLSVSQKIGYAAEYV     50

BSNT_02043___     50 YKTLVAATGTNHYYVFVVPVAEELDVKKAAKVTGEKKIEMIAMKELLAVT     99
                     ||||||:.||:.|||||||||:||::|||||..|||||||||||:||.||
RBAM_024230__     51 YKTLVASAGTDRYYVFVVPVAKELNLKKAAKAAGEKKIEMIAMKDLLGVT    100

BSNT_02043___    100 GYLRGGCSPIGMKKLFPTYIDASAEALDFIIVSAGKIGMQLKLAPQDLAR    149
                     ||:|||||||||||.|||:||.|||.|:|:||||||||||||.||||||.
RBAM_024230__    101 GYMRGGCSPIGMKKRFPTFIDRSAETLEFMIVSAGKIGMQLKAAPQDLAE    150

BSNT_02043___    150 SCDAAFAEIV    159
                     :..|.|.:||
RBAM_024230__    151 ASGAVFTDIV    160


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