Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02043 and RBAM_024230

See Amino acid alignment / Visit BSNT_02043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence dna-align/BSNT_02043___yjdI.1.9828.seq
#    -bsequence dna-align/RBAM_024230___yjdI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02043___yjdI-RBAM_024230___yjdI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02043___yjdI-RBAM_024230___yjdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02043___yjdI
# 2: RBAM_024230___yjdI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity:     373/484 (77.1%)
# Similarity:   373/484 (77.1%)
# Gaps:           5/484 ( 1.0%)
# Score: 1410.0
# 
#
#=======================================

BSNT_02043___      1 ATGGCGAAAAAAATGGCAAAAACAAATGCGGTTCGTCTGATAGAACAGCA     50
                     |||||||||||||..|..|||||||||||.||.|||.|.||.||.|||||
RBAM_024230__      1 ATGGCGAAAAAAACAGTGAAAACAAATGCTGTCCGTATCATTGAGCAGCA     50

BSNT_02043___     51 GAACATCTCTTATGAGGTATTAGGGTATAAAACAGA---CGGCCAGCCGG     97
                     .|||||..|.||||||.|||||||.||.||||||||   .||.|||||.|
RBAM_024230__     51 AAACATTCCCTATGAGCTATTAGGTTACAAAACAGAAGGGGGACAGCCCG    100

BSNT_02043___     98 TAGATGGCATCTCTGTTGCGGAAAAAATCGGTTATCCTTTGAAATATGTA    147
                     .|||.||..|.||.|||.|..||||||||||.||..||....|||||||.
RBAM_024230__    101 CAGACGGTCTTTCCGTTTCACAAAAAATCGGATACGCTGCCGAATATGTT    150

BSNT_02043___    148 TATAAAACGTTGGTTGCAGCAACAGGAACAAATCATTATTATGTCTTTGT    197
                     ||||||||.||.||.|||.|..|||||||..|||.||||||.||||||||
RBAM_024230__    151 TATAAAACCTTAGTGGCATCTGCAGGAACTGATCGTTATTACGTCTTTGT    200

BSNT_02043___    198 TGTACCCGTTGCAGAAGAGTTAGATGTAAAAAAGGCAGCAAAGGTGACAG    247
                     .||.|||||||||.||||..|..||.|.|||||.||.||.||||.|.|||
RBAM_024230__    201 CGTTCCCGTTGCAAAAGAACTGAATCTGAAAAAAGCTGCGAAGGCGGCAG    250

BSNT_02043___    248 GGGAAAAGAAAATAGAAATGATTGCAATGAAGGAGCTATTAGCGGTAACT    297
                     |.||.||||||||||||||||||||.||||||||.||.||.|..|||||.
RBAM_024230__    251 GTGAGAAGAAAATAGAAATGATTGCCATGAAGGACCTTTTGGGAGTAACC    300

BSNT_02043___    298 GGCTATCTTCGCGGCGGCTGCTCGCCAATTGGCATGAAAAAATTGTTCCC    347
                     ||||||.|.||||||||||||||.||.||.||||||||||||..|||.||
RBAM_024230__    301 GGCTATATGCGCGGCGGCTGCTCTCCGATCGGCATGAAAAAAAGGTTTCC    350

BSNT_02043___    348 GACCTATATTGATGCATCTGCAGAAGCGCTTGATTTTATTATTGTCAGTG    397
                     |||.|.|||||||..|||.||.|||.|.||.||.|||||.||||||||||
RBAM_024230__    351 GACTTTTATTGATAGATCCGCTGAAACACTGGAGTTTATGATTGTCAGTG    400

BSNT_02043___    398 CAGGGAAAATCGGTATGCAGCT-AAAGTTGGCGCCACAAGATTTAGCCAG    446
                     |.|||||||||||.|||||||| |||| ..|||||.||||||||||||..
RBAM_024230__    401 CGGGGAAAATCGGAATGCAGCTGAAAG-CAGCGCCTCAAGATTTAGCCGA    449

BSNT_02043___    447 ATCATGTGATGCCGCATTTGCAGAAATTGTATAG    480
                     |.||.|.|..||.|.||||.||||.||||||||.
RBAM_024230__    450 AGCAAGCGGGGCGGTATTTACAGACATTGTATAA    483


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