Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03822 and RBAM_024000

See DNA alignment / Visit BSNT_03822 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence pep-align/BSNT_03822___yqeF.1.9828.seq
#    -bsequence pep-align/RBAM_024000___yqeF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03822___yqeF-RBAM_024000___yqeF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03822___yqeF-RBAM_024000___yqeF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03822___yqeF
# 2: RBAM_024000___yqeF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     182/243 (74.9%)
# Similarity:   211/243 (86.8%)
# Gaps:           0/243 ( 0.0%)
# Score: 1008.0
# 
#
#=======================================

BSNT_03822___      1 MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWV     50
                     ||..::...::.:.:||.....:.||||||||||||||||||||||||||
RBAM_024000__      1 MKFAVLFITIICLLSGCAAGEEKSVVAFGDSNTRGSNWDYRDYPKAQQWV     50

BSNT_03822___     51 NILKTAERGNLDILNAGIGGQTTEDARLRFQTDVLDQKPKYLFIMFGTND    100
                     |||||||||.|.::|||||||||||||||||:||||:||:||||||||||
RBAM_024000__     51 NILKTAERGRLTVINAGIGGQTTEDARLRFQSDVLDRKPQYLFIMFGTND    100

BSNT_03822___    101 AAILTEGKPRVSKQRFRENLVYFIEESRKHGIKPILMTCIPIIEGNGKHH    150
                     |.|||..:|||||:||:|||.|||.|||.||||||||||||:|||||.||
RBAM_024000__    101 AGILTGDQPRVSKKRFKENLTYFINESRNHGIKPILMTCIPVIEGNGTHH    150

BSNT_03822___    151 LFYYSRYQAAAFEPKGGARKWHNSYNDITRDVSKRLDVPLVDNWKHFIEA    200
                     |:||:||:|:||:.||||||||||||.:||.|:..|.|||||||||||.|
RBAM_024000__    151 LYYYARYKASAFKEKGGARKWHNSYNGVTRQVAAELKVPLVDNWKHFIRA    200

BSNT_03822___    201 DGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQILQR    243
                     ||||.||.||||||||||||||||||||||:.|||::|::|:|
RBAM_024000__    201 DGGKDTDRALIQSGLIDPSGNHMTPKGARILIEGIKNGRVLER    243


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