Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03813 and RBAM_023910

See DNA alignment / Visit BSNT_03813 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_03813___yqeM.1.9828.seq
#    -bsequence pep-align/RBAM_023910___yqeM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03813___yqeM-RBAM_023910___yqeM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03813___yqeM-RBAM_023910___yqeM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03813___yqeM
# 2: RBAM_023910___yqeM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     194/247 (78.5%)
# Similarity:   217/247 (87.9%)
# Gaps:           2/247 ( 0.8%)
# Score: 1032.0
# 
#
#=======================================

BSNT_03813___      1 MIYQGFASVYDELMSHAPYDQWTNWIEASLPEKGRILDLACGTGEISIRL     50
                     |||||||.||||||||||||:|..|||||||||||:||||||||||||||
RBAM_023910__      1 MIYQGFAGVYDELMSHAPYDEWAGWIEASLPEKGRVLDLACGTGEISIRL     50

BSNT_03813___     51 AEKGFEVTGIDLSEEMLSFAQQKVSSSQPILFLQQDMREITGFDGQFDAV    100
                     ||||.|||||||||:|||.|||| .:.:|||||||||||::||:.|||||
RBAM_023910__     51 AEKGCEVTGIDLSEDMLSCAQQK-KTGKPILFLQQDMRELSGFEEQFDAV     99

BSNT_03813___    101 VICCDSLNYLKTKNDVIETFNSVFRVLKSEGILLFDVHSSFKIAEVFPDS    150
                     ||||||||||||||||:.||.|||:|||..|:|||||||.||:.|:||||
RBAM_023910__    100 VICCDSLNYLKTKNDVLSTFKSVFQVLKEGGLLLFDVHSPFKMTELFPDS    149

BSNT_03813___    151 TFADQDEDISYIWQSFAGSDELSVIHDMSFFVWNGEAYDRFDETHEQRTF    200
                     |.|||||.||||||||||.:|||||||||||||||::|||:||||||:||
RBAM_023910__    150 THADQDEQISYIWQSFAGDEELSVIHDMSFFVWNGQSYDRYDETHEQKTF    199

BSNT_03813___    201 PVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQKSKTIVS    247
                     .:||||:||...||:|.:|||||||..||.:||||||.|.|.|||| 
RBAM_023910__    200 YIEEYEQMLAETGFKLKKVTADFTDRPPSTESERLFFTAGKPKTIV-    245


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