Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03812 and RBAM_023900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_03812___comER.1.9828.seq
# -bsequence pep-align/RBAM_023900___comER.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03812___comER-RBAM_023900___comER.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03812___comER-RBAM_023900___comER.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03812___comER
# 2: RBAM_023900___comER
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity: 215/273 (78.8%)
# Similarity: 239/273 (87.5%)
# Gaps: 0/273 ( 0.0%)
# Score: 1099.0
#
#
#=======================================
BSNT_03812___ 1 MKIGFIGTGNMGTILIESFIESKAADPSNMTITNRTIEKALHIKNRYNSI 50
||||||||||||||||||||||.|||||::|||||||||||.:|.|::.|
RBAM_023900__ 1 MKIGFIGTGNMGTILIESFIESNAADPSHITITNRTIEKALKLKERFSGI 50
BSNT_03812___ 51 NVTESLEKLVSENEMIFICVKPLDIYPLLARALPYLRKDHILISITSPVQ 100
:|||..||||.|||:||||||||||||||.:..|:|||||||||||||||
RBAM_023900__ 51 HVTEDQEKLVQENEIIFICVKPLDIYPLLKKLTPHLRKDHILISITSPVQ 100
BSNT_03812___ 101 TEQLEQYVPCQVARVIPSITNRALAGVSLVTFGTSCGESAKTKINELMQH 150
|:|:|..||||.|||||||||||||||||||||.||.||||..|..|..|
RBAM_023900__ 101 TDQIEHTVPCQTARVIPSITNRALAGVSLVTFGKSCSESAKADIQTLFTH 150
BSNT_03812___ 151 ISHPLQIESDITRVASDIVSCGPAFMSYLIQRFIDAAVSETSVSKQDAIL 200
||.|::|.|.|||.|||||||||||||||:||||||||.||.::|::|::
RBAM_023900__ 151 ISKPVEISSGITRAASDIVSCGPAFMSYLVQRFIDAAVEETDITKEEAVI 200
BSNT_03812___ 201 MCKEMLVGMGKLLETELYTLPALQEKVCVKGGVTGEGIKALESGVQDMFH 250
|..|||||:||||||..||||||||||||||||||||:|||||||||||:
RBAM_023900__ 201 MSTEMLVGLGKLLETGHYTLPALQEKVCVKGGVTGEGLKALESGVQDMFN 250
BSNT_03812___ 251 RVFQNTHMKYEEDISAVKKQFHV 273
||||.||.||:||||.|||||||
RBAM_023900__ 251 RVFQRTHDKYDEDISLVKKQFHV 273
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