Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03811 and RBAM_023890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_03811___comEA.1.9828.seq
# -bsequence pep-align/RBAM_023890___comEA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03811___comEA-RBAM_023890___comEA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03811___comEA-RBAM_023890___comEA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03811___comEA
# 2: RBAM_023890___comEA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 114/213 (53.5%)
# Similarity: 145/213 (68.1%)
# Gaps: 17/213 ( 8.0%)
# Score: 501.0
#
#
#=======================================
BSNT_03811___ 1 ------MNWLNQHKKAI-ILAASAAVFTAIMIFLATGKNKEPVK-QAVPT 42
...|.::.|.: ...|:.||| |.|:|...:.:|||| |:|..
RBAM_023890__ 1 MTKAMMTERLRRNLKILGACLAAGAVF--ICIWLFRSEKEEPVKQQSVLG 48
BSNT_03811___ 43 ETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRTGDRVSQAIEKAG 92
:|.:..|..: .|.:.:.|:||:||||::||||||:.||||:|||||||
RBAM_023890__ 49 QTASASVADK--KDTAADKIMIDVKGAVRNPGVYEMKAGDRVTQAIEKAG 96
BSNT_03811___ 93 GTSEQADEAQVNLAEILQDGTVVYIPKKGEEIAVQQGGGGSVQSDGGKGA 142
|..::|||..|||||.|||||:||||.:|||....:...|..:: |
RBAM_023890__ 97 GLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKEN-----A 141
BSNT_03811___ 143 LVNINTATLEELQGISGVGPSKAEAIIAYREENGRFQTIEDITKVSGIGE 192
.||||.|:|:|||.|||||..|||||||||||||||||.||:..|||.||
RBAM_023890__ 142 AVNINMASLDELQAISGVGQKKAEAIIAYREENGRFQTAEDLMNVSGFGE 191
BSNT_03811___ 193 KSFEKIKSSITVK 205
||||:||:|||||
RBAM_023890__ 192 KSFERIKTSITVK 204
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